Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 590 a.a., ABC transporter transmembrane domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  278 bits (710), Expect = 6e-79
 Identities = 188/595 (31%), Positives = 304/595 (51%), Gaps = 25/595 (4%)

Query: 2   AETPRPAEHTSSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVD-GLS 60
           A+TPRPA    +L+    L  ++KP+  + L  ++   + +    +L    ++ +D G  
Sbjct: 6   ADTPRPARRIGALR---ELWPFLKPHRALALGWLLFLALSSGASLVLPLAFRHIIDQGFG 62

Query: 61  NPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYF-LAKVSLSLVHDLRVAL 119
           +       N    +    L  V L++    A          YF +  +S   +  LR  L
Sbjct: 63  HSS-----NTVINQTFVALFGVALVLAFATA--------ARYFCITLLSERALASLRQTL 109

Query: 120 FNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMN 179
           +  ++ L   +F+    G L+SR++ +  +V       + V +R  + +V     ++W  
Sbjct: 110 YAHVIRLDVGFFEKSRVGELLSRLSADTEVVQALIGSGVSVALRSAVMLVGAAVAMVWTA 169

Query: 180 WHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEA 239
             L  +   ++P + + + +  ++ +K S+  Q  + D   +A+ET+     V+++  E 
Sbjct: 170 PSLAGLTALVIPAVMLPILVFGRRVQKLSRASQDRLADAAAIANETLNASTAVKAYARED 229

Query: 240 YEQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVL--FLRGDSTAGDL 297
            E  R+G A         R     +L T  + ++++ A+  +++      L G   AG L
Sbjct: 230 IESSRYGGAITRALATARRRIGMRALLTMAVIVLVFGAITLVLWAGARHVLAGTLGAGVL 289

Query: 298 VAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEK---ERVEGR 354
             ++  A      +  LSEV   + +     E I E L E  ++      +   + + G 
Sbjct: 290 GQFVLYAVFAAGSVAGLSEVWGDVLRAAGAMERIGELLGERADIVDPRQPRALPQPMRGE 349

Query: 355 LEVRNLSFTYPGT-EREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQI 413
           L    ++F YP   +   L D +    PG+ +ALVG SG+GKST+ +L+ RFY    G I
Sbjct: 350 LRFDGVTFHYPTRPDTAALHDFTLTVHPGETVALVGPSGAGKSTVFSLLLRFYDPQSGSI 409

Query: 414 LLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAK 473
            +DGV++    L  LR  ++ V Q   +F  + A+NI +G    A   ++  AA  A A 
Sbjct: 410 RIDGVDLRETTLAGLRGAIALVPQETVIFAGSAADNIRFGR-QDAGDDEVREAARAAEAH 468

Query: 474 EFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 533
           EF+  L  G+D E+GE GV LSGGQRQR+AIARA+L++APLL+LDEATSALD +SE  IQ
Sbjct: 469 EFIGALDHGYDAELGERGVRLSGGQRQRIAIARAILRDAPLLLLDEATSALDAQSEAAIQ 528

Query: 534 AALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARL 588
            AL  + QGRTTLVIAHRL+T+++AD+I+VMD GR+V +GTH  LLA  G YA L
Sbjct: 529 QALARLEQGRTTLVIAHRLATVQRADRIVVMDGGRIVAQGTHESLLAEGGLYAEL 583