Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

 Score =  374 bits (959), Expect = e-108
 Identities = 214/561 (38%), Positives = 333/561 (59%), Gaps = 23/561 (4%)

Query: 39  VIFASTQPMLAGILKYFVD-GLSNPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGS 97
           ++ A T+P++A +LK  +D G +  E  L+              VP  ++L+ A +G+  
Sbjct: 1   MLAAITEPLMAALLKPLLDRGFTRGEMPLW-------------FVPAAVLLLFAVRGIAQ 47

Query: 98  FLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDA 157
           F+  Y L++++   +  LR  +F +LL      F   ++  L + + + V         A
Sbjct: 48  FISQYALSRIANEGMQKLRRVMFERLLGAELALFTRQSASALSNTVVYEVQTGAMLLVQA 107

Query: 158 IKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGD 217
           +  + R+G T++ L  YL+++NW LTL++  ++P I+ ++ + SK+  + +++ Q A  +
Sbjct: 108 LLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVPSISWIMKVFSKRLYRLTQQGQQATDE 167

Query: 218 VTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSA 277
           + +V  E +  +RVVR  G E  + +RF Q SQ      ++ T   +  TP+ Q++   A
Sbjct: 168 LAYVVEENVLAHRVVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIAQAATTPLTQMMASLA 227

Query: 278 MAALMFLVLFLRGDS--TAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQL 335
           ++ ++ + L+  G    T G  VAYITA  +L  PIR+L+EV+  I +GLA  E     +
Sbjct: 228 LSVVVMIALWQSGKQGFTVGGFVAYITAMLMLIAPIRRLAEVAGPITRGLAALERGLVLI 287

Query: 336 DEAPEVDTGTVEKERVEGRLEVRNLSFTYPGT-EREVLSDISFVAEPGQMIALVGRSGSG 394
           DE      GT   E  EGR+E+RN+  +Y G  E+  L  ++   EPGQ++A VG SGSG
Sbjct: 288 DEVAPESQGTFRIEHAEGRIELRNVQVSYRGDDEQRALDGVNLTIEPGQVVAFVGPSGSG 347

Query: 395 KSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGD 454
           K+TL  L+PRF     GQ+LLDG +   + L++LR   + V+Q V + N+T+A N+A G 
Sbjct: 348 KTTLVNLLPRFVQPSSGQVLLDGHDTSEWELKSLRAQFAMVSQDVVMLNETLAANVALGS 407

Query: 455 LAGAPRA--DIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNA 512
                R    I+AA   ++    V+ LP+G DT +G N   LSGGQRQRLAIARAL KNA
Sbjct: 408 EIDRERVLQCIDAANLSSH----VENLPQGIDTVLGHNATQLSGGQRQRLAIARALYKNA 463

Query: 513 PLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVER 572
           P+L+LDEATSALDTESER +Q AL  +MQ RTTL++AHRLSTI+ AD+I+VM+QGR+ E+
Sbjct: 464 PVLLLDEATSALDTESERLVQDALQRLMQNRTTLIVAHRLSTIQHADRIIVMEQGRIAEQ 523

Query: 573 GTHTELLAANGHYARLHAMGL 593
           G+H +L+  +G YARL  + +
Sbjct: 524 GSHEQLMQLDGLYARLQTLAV 544