Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 600 a.a., Lipid A export ATP-binding/permease protein MsbA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  368 bits (945), Expect = e-106
 Identities = 223/605 (36%), Positives = 350/605 (57%), Gaps = 32/605 (5%)

Query: 2   AETPRPAEHTSSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVD-GLS 60
           A   +P + T + ++  RL  Y +      +L+ V  ++ A T+P++  +LK  +D G +
Sbjct: 5   ARMHKPLDGTLTQRL-LRLWPYFRSAKTGIVLAAVATLVGALTEPLIPALLKTLLDRGFA 63

Query: 61  NPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALF 120
                L+              VP+ ++ +   +G+  F   Y L+  +   + +LR A+F
Sbjct: 64  QGNVELW-------------MVPVALMGLFGMRGVAGFTAQYALSYTASLGLLNLRRAMF 110

Query: 121 NKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNW 180
            KL       F   N+  L + + + V   +     A   + ++ L V+ L  YLL++NW
Sbjct: 111 VKLNDAQMTLFARQNASRLSNTLVYEVQTGSQLLVTAFLTLTKDSLAVIALMGYLLYLNW 170

Query: 181 HLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAY 240
            LTL+++ I P + +++ + S++F K ++  Q A  ++ +V  E +  +R+VR  G +A 
Sbjct: 171 KLTLIVLLIFPGLILIMRVLSRRFYKLTRDSQQATDELAYVVEENVLAHRMVRLHGAQAR 230

Query: 241 EQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDS--TAGDLV 298
           + QRF + S +     L+ T + +  TP+ QL+  +A++A++ + L+    S  T G+ V
Sbjct: 231 QSQRFDRLSMALRRLALKSTVSSAAMTPLTQLLASAALSAVIAVALWQSSTSGVTVGNFV 290

Query: 299 AYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVR 358
           A++TA  +L  PIR L+E+++ I +GLA  E   E ++  PE   G+   +RV G + +R
Sbjct: 291 AFVTAMLMLITPIRHLAEIAAPIARGLAALERGLELIEHTPEQSGGSHTADRVSGSISLR 350

Query: 359 NLSFTYP----GTERE------VLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHH 408
           ++   YP    G  RE       L  +S    PG+++A VG SGSGK+TL  L+PRF   
Sbjct: 351 DVWVRYPAKDGGPAREDDDSLIALRGVSLDIRPGEVVAFVGPSGSGKTTLVNLLPRFVEV 410

Query: 409 DKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRAD---IEA 465
           ++G++ LDGV +  + LR+LRR  + V+Q V + NDT+A N+A G  A   + D   + A
Sbjct: 411 ERGEVWLDGVPLTEWELRSLRRQYAMVSQDVVMLNDTLAANVALG--AADDQIDEMRVRA 468

Query: 466 AAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALD 525
           A   A   E + RLP+G  + VG N   LSGGQRQRLAIARA+ K+AP+LILDEATSALD
Sbjct: 469 ALVSANLGELIQRLPQGIHSTVGHNAAELSGGQRQRLAIARAIYKDAPVLILDEATSALD 528

Query: 526 TESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHY 585
            ESER +Q AL  +M+GRTTLVIAHRLSTIE AD+++V+  GR+ E+G+H ELL A+G Y
Sbjct: 529 NESERLVQDALARLMKGRTTLVIAHRLSTIEHADRVIVLADGRIREQGSHRELLQADGLY 588

Query: 586 ARLHA 590
           ARLHA
Sbjct: 589 ARLHA 593