Pairwise Alignments

Query, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

Subject, 582 a.a., fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

 Score =  443 bits (1140), Expect = e-129
 Identities = 236/583 (40%), Positives = 373/583 (63%), Gaps = 15/583 (2%)

Query: 12  SSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVD-GLSNPEAVLFPNV 70
           S+ + + RL   + P+    +++ V  ++ A++   +  +LK  +D G            
Sbjct: 8   STWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKT-------- 59

Query: 71  PYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRY 130
               D  +L  +PL++I +   +G+ S++ +Y ++ VS  +V  +R  LF  ++ +P  +
Sbjct: 60  ----DRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSF 115

Query: 131 FDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAIL 190
           FD  ++G L+SRIT++   V  +++ A+  V+REG +++ LF  + + +W L+++++ + 
Sbjct: 116 FDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLA 175

Query: 191 PVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQ 250
           P++++ + + SK+FR  SK +Q  MG VT  A + ++G++ V  FGG+  E +RF + S 
Sbjct: 176 PIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSN 235

Query: 251 SNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLF--LRGDSTAGDLVAYITAAGLLP 308
               + ++M    S+  P++QL+   A+A +++   F  +    TAG +    ++   L 
Sbjct: 236 RMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALM 295

Query: 309 KPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYPGTE 368
           +P++ L+ V++  Q+G+A  +++F  LD   E D G    ER  G +E RN++FTYPG +
Sbjct: 296 RPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRD 355

Query: 369 REVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNL 428
              L +I+     G+ +ALVGRSGSGKST+A+LI RFY  D+G+IL+DG ++  Y L +L
Sbjct: 356 VPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASL 415

Query: 429 RRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVG 488
           R  V+ V+Q+V LFNDTVANNIAY       R  IE AA  AYA +F++++  G DT +G
Sbjct: 416 RNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIG 475

Query: 489 ENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVI 548
           ENGVLLSGGQRQR+AIARALL+++P+LILDEATSALDTESER IQAALD + + RT+LVI
Sbjct: 476 ENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVI 535

Query: 549 AHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLHAM 591
           AHRLSTIEKAD+I+V++ G +VERGTH +LL   G YA+LH M
Sbjct: 536 AHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKM 578