Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 705 a.a., Type I secretion system ATPase, LssB family LapB from Variovorax sp. SCN45

 Score =  325 bits (834), Expect = 4e-93
 Identities = 215/694 (30%), Positives = 365/694 (52%), Gaps = 15/694 (2%)

Query: 31  SGLVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGPLL--RAFQQLGLKAKHRSVDPAR 88
           S L  ++ +AR++G+  S E ++   + A ER +    L     +QLGL  +      A 
Sbjct: 9   SWLDAMLFVARHYGIGASEESVRV--SLAWERGAPLDTLLDHMARQLGLTVRLGEFSDAM 66

Query: 89  LQQTPLPAIAVDTRGEYFIIARVEGEQ---VLVQDPHSRAPQALTLAELLVRWSGELILV 145
           L    LP +     GE  ++   +G     VL+   H     AL LAEL +      +L 
Sbjct: 67  LDPWRLPLVVEFDNGEVGVVRASDGHGQLGVLLGGDHG-LETALPLAELRLHAKRVAVLR 125

Query: 146 RS----DAQLPLGLSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDK 201
            +    DA++   +  +   WF    ++  R +G++++ S+   +LAL + +F   + D+
Sbjct: 126 PNTAVPDARVDDYIKPYKANWFWAIALRDWRRYGDIVLASMFANVLALASMIFSMQIYDR 185

Query: 202 VLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTA 261
           V+  +   TL V+  G+++ V+FE +L   RT+++     R D+++   +F H + L T 
Sbjct: 186 VVPAQSEPTLWVLFGGVMLAVVFEFMLRVSRTHISDVIGKRADLKVSDVVFGHALRLRTD 245

Query: 262 YFHARRVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSL 321
              ++  G  +A+VRE+E +R  LT+ +I+ V D+ F ++F+ V++L +G L LV + ++
Sbjct: 246 A-RSKSTGSFIAQVREVEQVRELLTSTTISAVADLPFFLLFLVVLWLVAGPLALVALAAV 304

Query: 322 PFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLA 381
           P   +  L++   L  L  +  +  A   A LVEAV GI+ +K M  EP+   +WN    
Sbjct: 305 PLLVIPGLLIQKPLARLASEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHVND 364

Query: 382 AYVSASFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVS 441
                S + + L+SL       +  +V    L  G  LV+ G +T G L+  ++LA R+ 
Sbjct: 365 VSAGVSMRQRFLTSLLMTWTQEVQTIVYAVVLLAGCFLVMRGDMTTGALVGSSILASRMI 424

Query: 442 QPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTV-LPTLVGQIELDRVCFRY-R 499
            P+ +L+ ++  +QQ  V+   L  ++    +   G   V  P L G   L  V FRY +
Sbjct: 425 SPLAQLSGVFARWQQAKVARAGLDQLMQRPVDQADGARLVHAPALHGNYALAGVEFRYGK 484

Query: 500 PDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADV 559
            D    +    L+I AG+ + ++GR GSGKSTL +L+  L SP++G V  D  DL++ D 
Sbjct: 485 EDKSPALTIAQLQIQAGDKVALLGRMGSGKSTLLQLLAGLQSPQQGHVALDALDLSLIDP 544

Query: 560 ASLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETL 619
           A LRR +G++ Q+  LF  ++REN+ +G P A  ++V  A  +AGA  F+    +G + L
Sbjct: 545 ADLRRDMGLLTQNARLFHGSIRENVTMGMPLATDDQVFEAVAMAGALSFLQSRAEGLDEL 604

Query: 620 IGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVI 679
           I E G  LSGGQRQ + +AR L   P I++ DE T+  D  +ER +  +M      RT++
Sbjct: 605 IHEGGLGLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERHVIDSMGAWLGPRTLV 664

Query: 680 IIAHRLSAVRHADRIVVMERGQIIEQGTHDELLG 713
           +  HR+  ++  DRIVV++ G+I+  G+ D++LG
Sbjct: 665 VATHRMPVLQWVDRIVVIDGGRIVMDGSKDQVLG 698