Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 708 a.a., Type I secretion system ATPase, LssB family LapB from Variovorax sp. SCN45

 Score =  316 bits (809), Expect = 3e-90
 Identities = 210/695 (30%), Positives = 362/695 (52%), Gaps = 17/695 (2%)

Query: 31  SGLVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGPLL--RAFQQLGLKAKHRSVDPAR 88
           S L  ++ +AR++G+  S E  +     A ER +    L     +QLGL  +  +   A+
Sbjct: 12  SWLDAMVFVARHYGIGASEESARV--TLAWERGAPLDTLLDHMARQLGLSLRLDAFSDAQ 69

Query: 89  LQQTPLPAIAVDTRGEYFIIARVEGEQ---VLVQDPHSRAPQALTLAELLVRWSGELILV 145
           L    LP       GE  ++   +G+    VL+   H    +    A+ L R    + ++
Sbjct: 70  LDPWRLPLAVEFDDGEVGVVRTSDGKGRLGVLLGGDHGL--ETAVAADELRRRVRRVAIL 127

Query: 146 RSDAQLPLG-----LSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMD 200
           R    +P       +  +   WF    ++  R +G++++ S+   +LAL + +F   + D
Sbjct: 128 RPQTSVPDARVDDYIRPYQANWFWSIALRDWRRYGDIVLASVFANVLALSSMVFSMQIYD 187

Query: 201 KVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPT 260
           +V+  +  +TL V+  G+++ V FE LL   RT+++     R D+++   +F H + +  
Sbjct: 188 RVVPAQSESTLWVLFGGVMLAVAFEFLLRMSRTHISDVIGKRADLKVSDLVFGHALRVRN 247

Query: 261 AYFHARRVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGS 320
               +R  G  +A+VRE+E +R  LT+ +I  V D+ F ++F+ V+++ +G L  V + +
Sbjct: 248 DA-RSRSTGSFIAQVREVEQVRELLTSTTIGAVADLPFFLLFVVVLWMVAGPLAWVALAA 306

Query: 321 LPFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQL 380
           +P   +  L+V   L  L ++  +  A   A LVEAV GI+ +K M  EP+   +WN   
Sbjct: 307 VPLLVIPGLLVQKPLARLANEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHAN 366

Query: 381 AAYVSASFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRV 440
               S S + + L+ L       +  +V    L  G  LV++G +T G L+  ++LA R+
Sbjct: 367 DVAASVSMRQRFLTGLLMTWTQEVQGIVYAVVLLAGCFLVMKGEMTTGALVGSSILASRM 426

Query: 441 SQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTV-LPTLVGQIELDRVCFRY- 498
             P+ +L+ ++  +QQ  V+   L  ++    +  +    V +P L G   L    FRY 
Sbjct: 427 ISPLAQLSGVFARWQQAKVARTGLDQLMQRPVDQPEHARRVHVPALHGNYALTNAEFRYG 486

Query: 499 RPDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVAD 558
           + D    +    L++ AGE + ++GR G+GKSTL +L+  L++P+RG V  D  DL + D
Sbjct: 487 KDDKAPALSVAQLQVKAGEKVALLGRMGAGKSTLLQLMAGLHAPQRGHVSLDALDLRLID 546

Query: 559 VASLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYET 618
            A LRR +G++ Q+  LF  ++REN+ LG P A   +V+ A  +AGA  F+    +G + 
Sbjct: 547 PADLRRDMGLLTQNARLFHGSIRENVTLGMPMATDTQVLEAIAMAGALPFVHSRAEGLDD 606

Query: 619 LIGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTV 678
           LI E G  LSGGQRQ + +AR L   P I++ DE T+  D  +ER +   + R  A RT+
Sbjct: 607 LIHEGGLGLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERQVIDAVGRWLAPRTL 666

Query: 679 IIIAHRLSAVRHADRIVVMERGQIIEQGTHDELLG 713
           ++  HR+  ++  DRIVV+E G+I+  G+ D++LG
Sbjct: 667 VVATHRMPVLQWVDRIVVLEGGRIVMDGSKDQILG 701