Pairwise Alignments

Query, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

Subject, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

 Score =  315 bits (806), Expect = 7e-90
 Identities = 218/701 (31%), Positives = 369/701 (52%), Gaps = 21/701 (2%)

Query: 33  LVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGPLLRAF-QQLGLKAKHRSVDPARLQQ 91
           L  ++ +A ++ + VS ++++   AAA +      +LR   +Q GL  +    D   L+Q
Sbjct: 30  LEVMLQVAHHYRLDVSPQRIRL--AAAEDARPLNEILRHMARQAGLALRFVHFDAKGLRQ 87

Query: 92  TPLPAIAVDTRGEYFIIARVEGEQVLV------QDPHSRAPQALTLAEL----LVRWSGE 141
              P +     G+  ++  V  E  L       Q   SR P+      +    L+R +  
Sbjct: 88  WRTPLVLELDDGQLAVVESVTEEDDLAVVFAGDQGLTSRLPRDTLKGRISRVALLRPARP 147

Query: 142 LILVRSDAQLPLGLSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDK 201
           L  VR+D       + +D  WF   +++  R +G+V++ SLV  +LAL   LF   V D+
Sbjct: 148 LRDVRTDDYT----APYDRHWFARIVLRDLRPYGQVMIASLVANVLALAGVLFSMQVYDR 203

Query: 202 VLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTA 261
           V+    L TL V+  G+++ ++F+  +  LR  V      R D+ +   ++ H + L  +
Sbjct: 204 VIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNS 263

Query: 262 YFHARRVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSL 321
               +  G  ++++RELE+IR  +T+++ T++ D+ F ++F+ V +L  G L  + + +L
Sbjct: 264 V-RPKSTGSFISQLRELESIRDLITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVAL 322

Query: 322 PFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLA 381
               L  L+    L  L + S +  A   A LVE++ G+D +K++  E +  R+WN   A
Sbjct: 323 LAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNA 382

Query: 382 AYVSASFKTQNLSS-LANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRV 440
           A    + + + L++ L   +  + G +  V  + +GA +VI G LT G L+A +ML+ R+
Sbjct: 383 ACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIV-IGAPMVIAGDLTTGSLVAASMLSSRM 441

Query: 441 SQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTV-LPTLVGQIELDRVCFRYR 499
             P+ +L  + T +QQ  V++Q L  ++ +  +  +G+  V LP + G+  L +  FRY 
Sbjct: 442 MAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQANFRYS 501

Query: 500 PDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADV 559
            D   V+    L I  GE I V+GR+G+GKSTL + +       +G +  DG  +A  D 
Sbjct: 502 EDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDP 561

Query: 560 ASLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETL 619
           A LRR +G++ Q   LF  T+REN+ LG   A  +E++AA    GA +F+  LP G + L
Sbjct: 562 ADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHL 621

Query: 620 IGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVI 679
           I E G  LSGGQRQ + ++R L   P++L+ DE T++LD  +ER +  N+ R C  RT++
Sbjct: 622 ILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLV 681

Query: 680 IIAHRLSAVRHADRIVVMERGQIIEQGTHDELLGYPQGTYA 720
           I  HRLS ++  DRI+V++ G+I+     D  L   QG  A
Sbjct: 682 IATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQGAQA 722