Pairwise Alignments

Query, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 2e-38
 Identities = 122/447 (27%), Positives = 206/447 (46%), Gaps = 52/447 (11%)

Query: 29  PVRDPDELAFLPAALSLQETPVHPLPRYLQWSLLMFIGLALAWACIGEIDVIASAEGKIV 88
           PV+        PAA      P  P    L W +   +   LAWA   ++D +++  GK+V
Sbjct: 35  PVQKTGRSKTAPAAYYSPPEPPLPRASLLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVV 94

Query: 89  PSGRSKLIQASEVAVVQSIHVVDGQPVRKGDVLVELEGQLTEADIKRLGSELLAAQIDQA 148
           PS R ++IQ+ E  ++  + V +G  V +G+VL +L+   TE+ ++   S + AA    A
Sbjct: 95  PSSREQMIQSLEGGILVDLKVREGDIVDEGEVLAQLDRTKTESTVQESASRVRAALAMSA 154

Query: 149 RASTLLSALDGDVAPASLAPLIPQATAAQQAGAQRWLEGQYLELQATLEQADAEIGQRAA 208
           R       L  +V    LA   P+ ++          +   +  +  L Q+  E  Q A+
Sbjct: 155 R-------LTAEVGGTPLA-FPPEVSS----------DADLVRTETALYQSRRE--QLAS 194

Query: 209 EIRSAQGRADALRQLLVITRQLTADYKLLFSESAVAKHTYLEKEQARLEQERELALQRSR 268
            +         +R+ L +T  L            VA+    + E  RL+++   A     
Sbjct: 195 SLSGVTQALSLMRRELALTEPL------------VARGAASDVEVLRLKRQINEA----- 237

Query: 269 IDELNAARLAAQHRRSGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPV 328
             E  AA L +Q+    A   L +A  ++  EAQR +        +++   RL    SPV
Sbjct: 238 --ETKAADLKSQYYVK-AREDLAKANAEI--EAQRSVTR-----GRSDSLTRL-TFASPV 286

Query: 329 DGTVQQLAIHTQGGVVTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFT 388
            G V+ +A+ T GGV+ P   LMVIVP  E + VE ++  +D+ F+ PGQ   VK+  + 
Sbjct: 287 RGIVKDIAVTTVGGVLPPGGKLMVIVPLDEKLLVEARISPRDVAFIHPGQEAAVKVTAYD 346

Query: 389 FTRYGVVPGVVESISDDAIEDDRHGLLYSARIKLAKEALRVGDND---LPLTAGMAVRAE 445
           +  +G +PG V +IS D I+DD    +Y  R+ +  +   + + +    P+  GM    +
Sbjct: 347 YAIFGDLPGKVTTISPDTIQDDVKRDVYYYRVYIRTDVDHLKNKNGQSFPIVPGMIATVD 406

Query: 446 VIVDRRRVISFFLSPLQRHAKESLKER 472
           +    + V+ + L PL + A E+L+ER
Sbjct: 407 IRTGSKSVLDYLLKPLNK-AGEALRER 432