Pairwise Alignments

Query, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 4e-37
 Identities = 116/426 (27%), Positives = 196/426 (46%), Gaps = 54/426 (12%)

Query: 52  PLP--RYLQWSLLMFIGLALAWACIGEIDVIASAEGKIVPSGRSKLIQASEVAVVQSIHV 109
           PLP    + W +   +   LAWA   ++D +++  GK+VPS R ++IQ+ E  ++  + V
Sbjct: 42  PLPGASLVVWIVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKV 101

Query: 110 VDGQPVRKGDVLVELEGQLTEADIKRLGSELLAAQIDQARASTLLSALDGDVAPASLAPL 169
            +G  V  G VL +L+   TE+ ++   S + AA    AR +          A  +  PL
Sbjct: 102 REGDIVSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLT----------AEVNGTPL 151

Query: 170 IPQATAAQQAGAQRWLEGQYLELQATLEQADAEIGQRAAEIRSAQGRADALRQLLVITRQ 229
           +       + G  R     Y   Q+  EQ  + +                + Q LV+ R+
Sbjct: 152 VFPDEVRGEPGLVRTETALY---QSRREQLASSLA--------------GVNQALVLMRR 194

Query: 230 LTADYKLLFSESAVAKHTYLEKEQARLEQERELALQRSRIDELNAARLAAQHRRSGAIAQ 289
                +L  +E  V++    + E  RL+++   A       E  AA L +Q+    A   
Sbjct: 195 -----ELALTEPLVSRGAASDVEVLRLKRQINEA-------ETKAADLRSQYYVK-ARED 241

Query: 290 LRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPVDGTVQQLAIHTQGGVVTPAQT 349
           L +A  ++  EAQR +        +++   RL    SPV G V+ + + T GGV+ P   
Sbjct: 242 LAKANAEI--EAQRSVTR-----GRSDSLTRL-TFASPVRGIVKDIVVTTVGGVLPPGGK 293

Query: 350 LMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFTFTRYGVVPGVVESISDDAIED 409
           LM IVP  E + VE ++  +D+ F+ PGQ   VK+  + +  YG +PG V +IS D I+D
Sbjct: 294 LMEIVPLDEKLLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQD 353

Query: 410 DRHGLLYSARIKLAKEALRV---GDNDLPLTAGMAVRAEVIVDRRRVISFFLSPLQRHAK 466
           D    +Y  R+ +  +A  +        P+  GM    ++    + V+ + + PL + A 
Sbjct: 354 DVKRDVYYYRVYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPLNK-AS 412

Query: 467 ESLKER 472
           E+L+ER
Sbjct: 413 EALRER 418