Pairwise Alignments

Query, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  139 bits (351), Expect = 1e-37
 Identities = 120/430 (27%), Positives = 208/430 (48%), Gaps = 24/430 (5%)

Query: 52  PLPRYLQWSLLMFIGLALA-WACIG---EIDVIASAEGKIVPSGRSKLIQASEVAVVQSI 107
           P  R  QW     IG A+A  A +G    ++ +  A G+++PS R K IQ  E  +V S+
Sbjct: 22  PQGRRRQW----IIGGAVAVLALVGLGFPMETVVVAPGRVIPSDRVKSIQHLEGGIVSSV 77

Query: 108 HVVDGQPVRKGDVLVELEGQLTEADIKRLGSELLAAQIDQARASTLLSALDGDVAPASLA 167
            V +G  V+ G  LVE++   +  +++ L +   A Q  + R   +  +    +   S A
Sbjct: 78  LVKEGDKVKTGQPLVEIDLGGSGLNLEELTARYAATQATRVRL--MAESRGQPLRRESFA 135

Query: 168 PLIPQATAAQQAGAQ--RWLEGQYLELQAT--LEQADAEIGQRAAEIRSAQGRADALRQL 223
             I +     + GA   R LE + +   A   LEQA ++  ++ A+++    R + +++ 
Sbjct: 136 KDIDEGVFEGETGAYQARALEQRGVMAGAVSGLEQARSKKLEQQAKVKGLGDRLELMQKE 195

Query: 224 LVITRQLTADYKLLFSESAVAKHTYLEKEQARLEQERELALQRSRIDELNAARLAAQHRR 283
           L I+ QL        SE  V +   LEK +       ELA+ R  +   +AA   AQ + 
Sbjct: 196 LEISEQL-------LSEKLVGQVEVLEKRRQAESVRSELAVARQGVVSADAAITEAQAKM 248

Query: 284 SGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPVDGTVQQLAIHTQGGV 343
           + A  + RR   D     +R+ A+L ++L +A  +    V+ +P DG V+ L   + G V
Sbjct: 249 AEAEGRYRRRASDELATVERQFASLSEDLARARTQRSRTVVKAPSDGIVKGLRNSSPGWV 308

Query: 344 VTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFTFTRYGVVPGVVESIS 403
           V P ++++ +VP  + + VE ++   D GF+  GQ   VKI  + + RYG V G V+ ++
Sbjct: 309 VKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQTARVKITAYDYLRYGAVDGKVKLVA 368

Query: 404 DDAIEDD--RHGLLYSARIKLAKEALRVGDNDLPLTAGMAVRAEVIVDRRRVISFFLSPL 461
            DA  D    +G  Y  R+ ++     VG ++  +TAGM    ++ V     I + L P+
Sbjct: 369 ADADRDPAISNGAPY-YRLLISMSQSHVGRDENRITAGMESEVDLRVGTDPFIWYILRPV 427

Query: 462 QRHAKESLKE 471
            +  +E+ +E
Sbjct: 428 LKLRREAFRE 437