Pairwise Alignments

Query, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 282 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 3/208 (1%)

Query: 265 QRSRIDELNAARLAAQHRRSGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVL 324
           QR R+    A  L+  + R G I  +   ++ L         T +   NKA+   +L ++
Sbjct: 78  QRYRVQAQEAGELSDIYIREGQIVNIGDPLMRLEHVQPSSTNTSDAGENKAD---KLSLV 134

Query: 325 TSPVDGTVQQLAIHTQGGVVTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKI 384
            SPV G ++ + +    G ++P +TL+ I P  + + +E +V  +D+ F+ PGQ   +  
Sbjct: 135 VSPVRGIIRYILVDAATGQISPGRTLVEITPLDDKLLIEARVRLQDMAFLRPGQEAMMTF 194

Query: 385 ETFTFTRYGVVPGVVESISDDAIEDDRHGLLYSARIKLAKEALRVGDNDLPLTAGMAVRA 444
             +    +G + G ++ IS D   D      Y  R++  K  L   D  L +  GMA   
Sbjct: 195 TAYDDITFGGLKGYIDQISQDMATDQAGNSFYLVRLRTEKNYLGNIDKPLLILPGMAAHV 254

Query: 445 EVIVDRRRVISFFLSPLQRHAKESLKER 472
            +I  R+ ++S+ L P+++   E+L+ER
Sbjct: 255 NIITGRKTLLSYLLKPIRQARAEALRER 282



 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 31  RDPDELAFLPAALSLQETPVHPLPRYLQWSLLMFIGLALAWACIGEIDVIASAEGKIVPS 90
           +DP  L+ +  AL +++TP   + R   W +L F    + WA + EID +  A GK +  
Sbjct: 20  QDPQALSDVGQAL-VEDTP--RIIRLSIWIMLAFAVFLVGWASVAEIDEVVQATGKTLSQ 76

Query: 91  GRSKLIQASEVAVVQSIHVVDGQPVRKGDVLVELE 125
            +   +QA E   +  I++ +GQ V  GD L+ LE
Sbjct: 77  SQRYRVQAQEAGELSDIYIREGQIVNIGDPLMRLE 111