Pairwise Alignments

Query, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 14/217 (6%)

Query: 191 ELQATLEQADAEIGQRAAEIR--SAQGRADALRQLLVITRQLTADYKLLFSESAVAKHTY 248
           + +   EQADA+I      ++   AQ       Q   + ++   D  L  +E    + T 
Sbjct: 155 DYRIAFEQADAQIRTEQLSLKRIDAQIIGGEAAQEQAVAQKGALDAALRGAEITQKRATE 214

Query: 249 LEKEQARLEQERELALQRSRIDELNAARLAAQHRRSGAIA--QLRRAMLDLHGEAQRRIA 306
           L+ +        + A  +  +D+  A  +A +   S A A  +L RA  +   EA+  I 
Sbjct: 215 LQAKDVGTVAASDNA--QVALDQARANVVAGEAAISSAKANVELLRAQRE---EAESTIR 269

Query: 307 TLEQELNKAEQRHRLKVLTSPVDGTVQQLAIHTQGGVVTPAQTLMVIVPTGEPVEVEVKV 366
           +L+   +KA +     VL +P DG +  LA+ T G +V+  + L  +VP  E + ++   
Sbjct: 270 SLQLSKDKAARDLAFTVLKAPYDGVIGNLAVQT-GDLVSVGKRLASLVPMNE-LYIDANF 327

Query: 367 ENKDIGFVFPGQHVEVKIETFTFTRYGVVPGVVESIS 403
           +   +  V PG  V V ++ F       + G V+SIS
Sbjct: 328 KETQLARVVPGSKVRVHVDAFDDE---AIEGTVQSIS 361



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 18/145 (12%)

Query: 91  GRSKLIQASEVAVVQSIHVVDGQPVRKGDVLVELEG--------------QLTEADIKRL 136
           G   +I       V  ++VV+ Q V+ GD LV L+               +  +  +KR+
Sbjct: 118 GDIAVIAPKVAGYVAKVNVVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRI 177

Query: 137 GSELLAAQIDQARASTLLSALDGDVAPASLAPLIPQATAAQQAGAQRWLEGQYLELQATL 196
            ++++  +  Q +A     ALD  +  A +         A+  G     +      Q  L
Sbjct: 178 DAQIIGGEAAQEQAVAQKGALDAALRGAEITQKRATELQAKDVGTVAASD----NAQVAL 233

Query: 197 EQADAEIGQRAAEIRSAQGRADALR 221
           +QA A +    A I SA+   + LR
Sbjct: 234 DQARANVVAGEAAISSAKANVELLR 258