Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 493 a.a., outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) from Escherichia coli BW25113

 Score =  258 bits (660), Expect = 2e-73
 Identities = 158/435 (36%), Positives = 233/435 (53%), Gaps = 6/435 (1%)

Query: 31  DLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEPSIT 90
           +L+ VYQ+A  +N +L  + AD  A  E + +AR+ LLP L  GA+   +    D   I 
Sbjct: 24  NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGIN 83

Query: 91  SNRSGNSWSATLAQPIFRADRWFQLQAAEAVNEQAALELSATEQNLILQTAQNYFAVLRA 150
           SN +  S S  L Q IF   +W  L   E       +     +Q LIL TA  YF VL A
Sbjct: 84  SNAT--SASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNA 141

Query: 151 QDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQVQDAF 210
            D L+ T+A++ A  RQLDQ+ +RF+VGL   TDV  ++A YDT  AN + A   + +A 
Sbjct: 142 IDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAV 201

Query: 211 EALVTLTNREYTSIQGV-VHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSAAEETL 269
           E L  +T   Y  +  + V +     P P    A ++ A ++NL+LL    +   A E +
Sbjct: 202 EQLRQITGNYYPELAALNVENFKTDKPQP--VNALLKEAEKRNLSLLQARLSQDLAREQI 259

Query: 270 RQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYS-GDVEQTSVGLQLNIPIYSGGL 328
           RQ + GH PTLD  A     D    G       G +Y   ++ Q  VGL  ++PIY GG+
Sbjct: 260 RQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGM 319

Query: 329 TSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQSALEA 388
            +SQV++A      + +Q ES  R VV+  R+    +N  +  + A KQ+++S QS+L+A
Sbjct: 320 VNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDA 379

Query: 389 TEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQDLQDLKR 448
            E GY VGTR IVDVLDA   LY + ++  N+RY+Y+++ L++K A GTL+ QDL  L  
Sbjct: 380 MEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNN 439

Query: 449 YLKPDYNPDKDFLPP 463
            L    + + + + P
Sbjct: 440 ALSKPVSTNPENVAP 454