Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 438 a.a., TolC family outer membrane protein from Erwinia tracheiphila SCR3

 Score =  134 bits (336), Expect = 8e-36
 Identities = 106/394 (26%), Positives = 185/394 (46%), Gaps = 17/394 (4%)

Query: 62  QARAGLLPNLSAGAEMMNTRTKLDEPSIT--SNRSGNSWSATLAQPIFRADRWFQLQAAE 119
           Q  AGLLP +S    + +T  K D+P  T  +    +++S  L QP+F   R+   Q AE
Sbjct: 55  QGFAGLLPEIS----LSSTWYKQDQPGATYAAGIKHHNYSINLQQPLFDLSRYATWQRAE 110

Query: 120 AVNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGL 179
           A    A       +Q LI   A  YF VL  +  L   + E   +K QL+++ +   +G 
Sbjct: 111 AAANAADATFMLAQQKLIQNVASAYFGVLFTRKKLDTFQRESKGYKFQLEKAKQALAIGD 170

Query: 180 SDKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSI-QGVVHSLPVQVPTP 238
             + D+ ++QASYD +  + + A+ ++  A      LT      I +G +  L    P  
Sbjct: 171 GTQLDMDEAQASYDRSNTDMLTAQDELSQAGIDFNRLTGLSADEIKEGDLQCL--FQPVR 228

Query: 239 NDAKAWVETAGRQNLNLLATNYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTN 298
            +    V+ A + N N++A  Y +  A   +    A H P +   A Y  G+N S    N
Sbjct: 229 ENMDTVVKRAVQNNFNVVAALYHLEEARADVTAAAAAHLPVVSLQATY--GNNWSRA-EN 285

Query: 299 PSQLGVRY--SGDVEQTSVGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVE 356
            + L   +  +     T +G+ +++P+++GG   SQ  EA  R +Q+    E  RR+V +
Sbjct: 286 GNLLDEVFGTTSKTRNTLIGVNVSVPLFAGGKMLSQSFEASSRRNQNLMLVEDARRKVAQ 345

Query: 357 NTRNLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRD 416
            T      +  ++E++ + K+   S++  L++T  G +VG R ++D  +A++ LY S++D
Sbjct: 346 QTTVSWLGLKNNLEKIHSLKKLQHSSRKKLDSTIYGKEVGLRTLLDQFEAEKDLYRSIQD 405

Query: 417 YNNSRYDYILDNLSLKQAAGTLSPQDLQDLKRYL 450
              +   ++   + L  A G L   D   L  Y+
Sbjct: 406 LAAAENKFLQTKIELDAATGEL---DYSTLNNYI 436