Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 467 a.a., TolC family outer membrane protein from Dickeya dianthicola ME23

 Score =  144 bits (364), Expect = 5e-39
 Identities = 111/430 (25%), Positives = 195/430 (45%), Gaps = 20/430 (4%)

Query: 32  LVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEP---- 87
           L+  ++ A+ N+A L AA  +  A +E V   RAGLLP+L     +  + +K+ +     
Sbjct: 29  LLDAWELALRNDAQLQAAGFERDAGQEEVAIGRAGLLPSLQYNYGVNYSHSKVTQQDRAL 88

Query: 88  SITSNRSGNSWSATLA--QPIFRADRWFQLQAAEAVNEQAALELSATEQNLILQTAQNYF 145
           + T+ R  +++ +TL   QP+     W + Q        A        Q+L+++  Q + 
Sbjct: 89  NNTTKRDYDNYVSTLTLRQPLLDYAAWARYQQGITRKLMADQRFRDRSQDLMVRLYQAWS 148

Query: 146 AVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQ 205
             L AQ+ L    A+  A++ QL  +      G   +TD+ +++A Y    A RI  E  
Sbjct: 149 EALLAQEKLLLLDAQRRAYQEQLALNRRLLAAGEGTQTDLRETEARYTVTEAQRIEQEDT 208

Query: 206 VQDAFEALVTLTNREYTSIQGV----VHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYA 261
           +  A   L  +       IQ +    + +LP  V        W E A R N  L      
Sbjct: 209 LDAAMTDLENMMGLPL-QIQDLSPLALDTLPDNVTENRSLSQWRELAVRHNAKLAVQREN 267

Query: 262 VSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGDVEQTSVGLQLNI 321
           V  +   + + +AGH PTLD VA  +   ++S            Y+   +  +VGLQ+ +
Sbjct: 268 VDYSRYEIERNRAGHLPTLDLVASTRNSLSES---------EYNYNQKYDTQTVGLQVRV 318

Query: 322 PIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIIS 381
           P+YSGG  S+ +R+A     QS+ + ++  RQ     R           +++A + S+ +
Sbjct: 319 PLYSGGAVSASMRQATAEYQQSQAELDNQTRQTFAELRRQFNLCANGAAKIRAWQMSVTA 378

Query: 382 NQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQ 441
            + A+ AT      G R  +DVL A+++ Y + R+    +Y ++   L+L+   GTL+ Q
Sbjct: 379 AEEAIRATRQSVAGGERINLDVLMAEQEWYNARRELTEVKYRWLQAWLNLRYTGGTLNEQ 438

Query: 442 DLQDLKRYLK 451
           D+  L  + +
Sbjct: 439 DMMQLAAWFQ 448