Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 470 a.a., outer membrane channel protein TolC from Dickeya dianthicola ME23

 Score =  251 bits (640), Expect = 5e-71
 Identities = 154/427 (36%), Positives = 230/427 (53%), Gaps = 19/427 (4%)

Query: 31  DLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEPSIT 90
           DL+ VYQ+A   N DL +A A+  A  E + +AR+ LLP L  GA+        D   + 
Sbjct: 24  DLLQVYQQAKTTNPDLRSAAANRDAAFEKINEARSSLLPQLGLGADYTYNNGYRDRKDVN 83

Query: 91  SNRSGNSWSATLAQPIFRADRWFQLQAAEAVNEQAALELSATEQNLILQTAQNYFAVLRA 150
           +N +  S S  L Q IF    W  L   E       +    ++Q L+L T+  YF VLRA
Sbjct: 84  NNVT--SASLQLTQSIFNMSLWRALTLQEKQAGIQDVSYQTSQQTLLLNTSTAYFNVLRA 141

Query: 151 QDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQVQDAF 210
            D L+   A++ +  R+LDQ+ +RF+VGL   TDV  +++ YD+  A+ + A   + +A 
Sbjct: 142 IDALSYVSAQKQSIYRELDQTTQRFNVGLVAITDVQNARSQYDSVLASEVTARNNLDNAM 201

Query: 211 EALVTLTNREYTSIQGV-VHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSAAEETL 269
           E L  +T   Y  + G+ +     Q   P+     ++ A  +NL+LL+   +   A E +
Sbjct: 202 EILRQVTGNFYPQLAGLNIDRFSPQ--KPDAVNGLLKEAENRNLSLLSARLSQDLAREQI 259

Query: 270 RQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGD------VEQTSVGLQLNIPI 323
           R  ++GH PTL+  A        S G TN +  G R +        V Q  +GL  ++PI
Sbjct: 260 RSAESGHLPTLNLTA--------STGVTNTNYSGSRVADSNLSDTYVGQNQIGLSFSLPI 311

Query: 324 YSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQ 383
           YSGG TSS+V++A      S +  ES  R V++  R+ H  ++  +  V A KQ++IS Q
Sbjct: 312 YSGGGTSSRVKQAQHSFVASSESMESAHRSVIQTLRSAHNNISASISSVNAYKQAVISAQ 371

Query: 384 SALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQDL 443
           S+L+A E GYQVGTR IVDVLDA   LY + +  + +RYDY+++ L+LKQA GTL+  DL
Sbjct: 372 SSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSGARYDYLINQLNLKQALGTLNEDDL 431

Query: 444 QDLKRYL 450
           + L   L
Sbjct: 432 RTLNAML 438