Pairwise Alignments

Query, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 467 a.a., TolC family outer membrane protein from Dickeya dadantii 3937

 Score =  148 bits (373), Expect = 4e-40
 Identities = 116/447 (25%), Positives = 206/447 (46%), Gaps = 26/447 (5%)

Query: 18  VVWAADVPSTVKTDLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNL--SAGA 75
           VV +    S     L+  ++ A+ N+A L AA  +  A +E V   RAGLLP+L  + GA
Sbjct: 10  VVLSLSCGSAQAMGLLDAWELALRNDAQLRAAGFERDAGQEEVAIGRAGLLPSLQYTYGA 69

Query: 76  EMMNTRTKLDEPSI--TSNRSGNSWSATLA--QPIFRADRWFQLQAAEAVNEQAALELSA 131
              +++    + ++  T+ R  +++ +TL   QP+     W + Q        A      
Sbjct: 70  NYSHSKVTQRDRTLNNTTKRDYDNYVSTLTLRQPLLDYAAWARYQQGVTRKLMADQRFRD 129

Query: 132 TEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQAS 191
             Q+L+++  Q++   L AQ+ L    A+  A++ QL  +      G   +TD+ +++A 
Sbjct: 130 RSQDLMVRLYQSWSEALLAQEKLMLLDAQRRAYQEQLALNRRLLAAGEGTQTDLRETEAR 189

Query: 192 YDTARANRIIAERQVQDAFEALVT-LTNREYTSIQG------VVHSLPVQVPTPNDAKAW 244
           Y    A RI    + +D  +A +T L N   + +Q        + +LP  V        W
Sbjct: 190 YTVTEAQRI----EQEDTLDAAMTDLENMMGSPLQIQDLSPLALDTLPDNVTENRSLSQW 245

Query: 245 VETAGRQNLNLLATNYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGV 304
            E   R N  L      V  +   + + +AGH PTLD VA  +   ++S           
Sbjct: 246 RELTVRHNAKLAVQRENVDYSRYEIERNRAGHLPTLDLVASTRNSLSES---------EY 296

Query: 305 RYSGDVEQTSVGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRNLHRA 364
            Y+   +  +VGLQ+ +P+YSGG  S+ +R+A     QS+ + ++  RQ     R     
Sbjct: 297 NYNQKYDTQTVGLQVRVPLYSGGAVSASMRQAAAEYQQSQAELDNQTRQTFAELRRQFNL 356

Query: 365 VNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDY 424
                 +++A + S+ + + A+ AT      G R  +DVL A+++ Y + R+    +Y +
Sbjct: 357 CANGAAKIRAWQMSVAAAEEAIRATRQSVAGGERINLDVLMAEQEWYNARRELTEVKYRW 416

Query: 425 ILDNLSLKQAAGTLSPQDLQDLKRYLK 451
           +   L+L+  AGTL+ QD+  L  + +
Sbjct: 417 LQAWLNLRYTAGTLNEQDMMQLAAWFQ 443