Pairwise Alignments

Query, 427 a.a., Transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

Subject, 435 a.a., Predicted hydroxymethylpyrimidine transporter CytX from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  278 bits (711), Expect = 2e-79
 Identities = 166/417 (39%), Positives = 225/417 (53%), Gaps = 22/417 (5%)

Query: 12  PIPIQQRIFGARDLFSLWFSLGIGLMVLQVGAMLAPGLGLAGAVLAIALGTGVGVLLLGA 71
           P+P   R+F   +  +LWFSLG GL+V+Q+GA L P +G   AV+AI LG+ +G  LL  
Sbjct: 14  PVPQGNRVFHFHEHAALWFSLGTGLLVMQIGAYLVPAVGTRDAVIAIVLGSLIGAGLLAW 73

Query: 72  AGVIGSDTGLSAMGTLKLSLGSHGARLPALLNLLQLVGWGAFEIIVMRDAA-----SLLG 126
              +G  TGLS+ G +  + GS  ARLP LLN+ QLVGW  FE+++M++         LG
Sbjct: 74  TARLGCQTGLSSAGLMHATYGSAFARLPVLLNIAQLVGWTTFELVIMQEGTVAILKQALG 133

Query: 127 ARAFGEESAWNSPMLWTLCFGALATLLAVSGPLAFVRKVLRAWGIWLLLGACLWLTWNLF 186
           A   G        +L TL +G + T L     L  VR+ +  +G+ L++ +  WLTW   
Sbjct: 134 AEPGGLLDGTGGKLLATLLWGGVLTALMAGSMLTLVRRFVSRFGLPLVIASLAWLTWQFG 193

Query: 187 AKAD---LAELWNRAGDGSMSLAVGFDIVIAMPLSWLPLIADYSRFARNGRHVFGGTVVG 243
            +         WNR G G M L    D+VIAMP+SWLPL+ADY+R  +      GGT +G
Sbjct: 194 TRLQAQGFEGFWNRPGAGGMGLFSAMDLVIAMPVSWLPLVADYARHGKRTASTLGGTWLG 253

Query: 244 YFIGNTWLMSLGV-AYTLAFAASGEVNALLLALAGAGMGIPLLLILLDESEKAFADIHSA 302
           Y + N W  +LGV   +     +  V +LLLA  G    I L LILLDE + A+ D HS 
Sbjct: 254 YALANIWCYALGVLVVSTVEPGTNLVGSLLLAQGGL---IALGLILLDEMDNAYGDAHSG 310

Query: 303 AVSTGVLLP-LKVEHLALAIGVLCTLIALLAPLAQYENFLLLIGSVFAPLFGVVLMDHYV 361
           AVS   L P   +    L   V+CT +ALL P+   E FLLL+ SVF PL+GV+L     
Sbjct: 311 AVSVHSLRPRWSIRAAGLGFAVVCTGLALLLPMHTLEPFLLLLSSVFVPLYGVIL----- 365

Query: 362 VRRRRLPAQVNG---LHWQALVAWFTGVVAYHLIAAKAPELGATLPALLLAGVLHGL 415
             R    A +     + W A   W  G+  YHL++  AP+LG+ LP L L  VL  L
Sbjct: 366 -GRLGSGATIGSNRTVDWSAAALWVLGIACYHLLSNFAPQLGSALPTLALTFVLAAL 421