Pairwise Alignments

Query, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

Subject, 630 a.a., DNA topoisomerase 4 subunit B from Escherichia coli ECRC62

 Score =  939 bits (2428), Expect = 0.0
 Identities = 458/628 (72%), Positives = 541/628 (86%), Gaps = 4/628 (0%)

Query: 9   YNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHADHS 68
           YNADAIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAGHA+ V VILHAD S
Sbjct: 5   YNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILHADQS 64

Query: 69  LEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALST 128
           LEV DDGRGMPVDIHPEEGV  VELIL +LHAGGKFSNKNYQFSGGLHGVGISVVNALS 
Sbjct: 65  LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124

Query: 129 QVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDSPKFSISRL 188
           +V V V+RDG  Y + F +G K  +L+VVG+ GKRNTGTSV+F PD  +FDSP+FS+SRL
Sbjct: 125 RVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRL 184

Query: 189 KHVLKAKAVLCPGLLVSFEDKASGEKVEWHYEDGLRSYLVDSVNEFQRLPDEPFCGSLAG 248
            HVLKAKAVLCPG+ ++F+D+ +  +  W Y+DGL  YL ++VN    LP++PF G+ AG
Sbjct: 185 THVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFAG 244

Query: 249 NKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 308
           + EAVDWALLWLPEGG+ + ESYVNLIPT QGGTHVNGLRQGLLDAMREFCE+RN+LPRG
Sbjct: 245 DTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPRG 304

Query: 309 VKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNAHPEL 368
           VKL+ ED+W+R  +VLS+KMQDPQF+GQTKERLSSR+ AAFVSGVVKDAF LWLN + + 
Sbjct: 305 VKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQA 364

Query: 369 GMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRAELFLVEGDSAGG 428
              LAE+AIS+A RR++A+KKV RK++T GPALPGKLADC  QD  R ELFLVEGDSAGG
Sbjct: 365 AELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGDSAGG 424

Query: 429 SAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGATDLAQLRYGK 488
           SAKQARD+E+QAI+PL+GKILNTWEV   EVLASQEVH+I+VAIG+DP + DL+QLRYGK
Sbjct: 425 SAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGK 484

Query: 489 ICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAMPPLYRIDLGKEIYYALDEAER 548
           ICILADADSDGLHIATLLCALFV+HFR LV+ GHVYVA+PPLYRIDLGKE+YYAL E E+
Sbjct: 485 ICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEK 544

Query: 549 DGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV--EATCEL 606
           +G+L++L  ++K+GKP V RFKGLGEMNP QLRETT+DPNTRRLVQLT+DD   + T  +
Sbjct: 545 EGVLEQL--KRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAM 602

Query: 607 MDKLLAKKRAGDRKSWLETKGNLAEVMV 634
           MD LLAKKR+ DR++WL+ KG++AE+ V
Sbjct: 603 MDMLLAKKRSEDRRNWLQEKGDMAEIEV 630