Pairwise Alignments

Query, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

Subject, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  431 bits (1107), Expect = e-125
 Identities = 246/643 (38%), Positives = 371/643 (57%), Gaps = 23/643 (3%)

Query: 9   YNADAIEVLSGLDPVRKRPGMY---TDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHA 65
           Y+A  I++L GL+ VRKRP MY         +HL  EV+DNS+DEALAGH  ++ V +  
Sbjct: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAGHCDTIHVTVLE 71

Query: 66  DHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNA 125
           D+S++V D+GRG+P D+H +E  S +E+++T LHAGGKF    Y+ SGGLHGVG+S VNA
Sbjct: 72  DNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVNA 131

Query: 126 LSTQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDSPKFSI 185
           LST ++  V R+G  ++  ++ G   + +  +G   KR  GT ++F PD   F   ++  
Sbjct: 132 LSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKR--GTIIHFVPDGDIFTVTEYKY 189

Query: 186 SRLKHVLKAKAVLCPGLLVSFED------KASGEKVEWHYEDGLRSYLVDSVNEFQRLPD 239
             + + L+  A L  G+ + F+D      + + +  E+  E GL  ++       +++  
Sbjct: 190 ETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQ 249

Query: 240 EPFCGSLAGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFC 299
           EP       N   V  A+ +     +++  SYVN I T +GGTHV+G R+ L   ++ + 
Sbjct: 250 EPIYIESEKNAVPVQVAMSYNSSFSENV-VSYVNTINTYEGGTHVSGFRRALTRTLKGYA 308

Query: 300 EFRNLLPR-GVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVSGVVKDAF 358
           +   +L +    ++ +D  E +T V+S+K+ +PQF GQTK +L + E  + V   V +  
Sbjct: 309 DKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVL 368

Query: 359 SLWLNAHP-ELGMQLAELAISNAGRRL--KASKKVERKRITQGPALPGKLADCAGQDPMR 415
             WL  HP E  + + ++ ++   R    KA + V+RK +  G  LPGKLADCA  +P  
Sbjct: 369 QYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEV 428

Query: 416 AELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGV- 474
            EL+LVEGDSAGGSAKQ RD++FQAILPL+GKILN  +    ++  + E+ NI  A+GV 
Sbjct: 429 CELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVK 488

Query: 475 -----DPGATDLAQLRYGKICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAMPP 529
                D    DL  LRY KI I+ DAD DG HI TL+  LF ++ R+L+E G+VY+A+PP
Sbjct: 489 FGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPP 548

Query: 530 LYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNT 589
           LY +  GK+  Y   E ER  +   +  + K     + R+KGLGEMNP QL  TTMDP +
Sbjct: 549 LYLLKKGKDERYCWSEDERIKLTKEMAGDGKTDNVGIQRYKGLGEMNPEQLWTTTMDPES 608

Query: 590 RRLVQLTLDDVEATCELMDKLLAKKRAGDRKSWLETKGNLAEV 632
           R L Q+T++       L   L+  + A  R+ ++E     A++
Sbjct: 609 RTLKQVTIESAAEADHLFSMLMGDEVA-PRREFIEKNAKYAKI 650