Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 745 a.a., DNA topoisomerase 4 subunit A from Xanthobacter sp. DMC5

 Score =  520 bits (1339), Expect = e-151
 Identities = 304/745 (40%), Positives = 439/745 (58%), Gaps = 27/745 (3%)

Query: 12  VERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSA 71
           +E+ +L +  E+ YL Y++  IM RALP   DGLKPV RRI++AM +L LD     KKSA
Sbjct: 13  IEKVTLKEALEERYLAYALSTIMHRALPDARDGLKPVHRRILHAMRQLRLDPGQGFKKSA 72

Query: 72  RTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEAR 131
           R VGDV+GKFHPHGD + Y+A+V +AQ F+ RY LVDGQGN+G  D   + AAMRYTEAR
Sbjct: 73  RVVGDVIGKFHPHGDQSVYDALVRLAQDFAQRYPLVDGQGNFGNVDGDNA-AAMRYTEAR 131

Query: 132 LSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHN 191
           L+  A +LL  + +  VD+ P +DG+ +EPAVLPA  PN+L NG+ GIAVGMAT +PPHN
Sbjct: 132 LTETARLLLDGIDEDAVDFRPTYDGSEEEPAVLPAAFPNLLANGSQGIAVGMATSIPPHN 191

Query: 192 LREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAV 251
             E+  A + L+D P A    L + + GPD+PT   +V     + + Y +GRGS R+RA 
Sbjct: 192 AAELLDAALHLIDHPDALAFDLLKFVPGPDFPTGGVLVEDPVGVAEAYATGRGSFRVRAR 251

Query: 252 YRVEDGD-----IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVI 306
           +  ED       +VVT +P+ V+ ++++E+IA  +  KKLP++AD+RDES  +   R+V+
Sbjct: 252 WEKEDTGRGGYVVVVTEIPYGVAKSRLVEKIAELLTDKKLPLLADVRDESAED--IRLVL 309

Query: 307 IPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVR 366
            PR+  VD + LM+ LF  T+LE+   +N+N++     P++ +L   L EWL+ R + + 
Sbjct: 310 EPRTRTVDAEVLMESLFKLTELEARIPLNMNVLVKGQIPKVLSLAEALREWLDHRRDVLL 369

Query: 367 RRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQALIERFELTEIQADYILE 426
           RR ++RLD++  RL +L G L A+LNLDEVI IIR E+ PK +L++ FELT++QA+ IL 
Sbjct: 370 RRSRYRLDQIAHRLEVLGGYLIAYLNLDEVIRIIREEDEPKVSLMQTFELTDVQAEAILN 429

Query: 427 TRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLRKLVRSELIKDAETYGDD---- 482
            RLR L RLEEM+IR E D L KEQ  L  L+ SE    K +  E+ +  +TYG +    
Sbjct: 430 MRLRSLRRLEEMEIRKEHDALSKEQDGLNRLVASETAQWKAISKEIRETRKTYGPETALG 489

Query: 483 -RRSPIVARAEAKALSENE-LMPTEPVTVVLSEKGWVRCAKGHDIDATGLSYKAGDGFKA 540
            RR+   A       +  E L+  EPVTVV+S KGW+R  KGH  D + L +K  D    
Sbjct: 490 RRRTTFAAAPTVHEDAFTEALVEREPVTVVVSAKGWIRALKGHVADVSNLQFKGDDSHGH 549

Query: 541 AAAGRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATFECVLLPDDDAL 600
           A    +    ++  S GR Y+L A  LP  RG GEP+   +     A    V        
Sbjct: 550 AFFAETTSKVMVFASNGRFYTLDASKLPGGRGHGEPVRLMIDLEQEAEIVSVFAYQAGRK 609

Query: 601 YVVASDAGYGFVVKGEDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQDWLAAVTTEGRL 660
            +VAS  G GFVV  +D  A  + GK +L        +  R V   + DW+A +    ++
Sbjct: 610 LLVASKQGRGFVVPEDDCLANTRKGKQVLVTDPPDAALAVRFV---DGDWVAVIGENRKM 666

Query: 661 LVFKVSDLPQLGKGKGNKIIGVPGDRVASREEFVTDLAVIPEGATLVLQ-AGKRTLSLKA 719
           LVF ++ +P++ +G+G ++          ++  ++DL V P    L  +    RT ++  
Sbjct: 667 LVFPLNQIPEMSRGRGVRL-------QRYKDGGLSDLKVFPMATGLTWEDTSGRTWTV-- 717

Query: 720 DDLEHYKGERGRRGSKLPRGFQRVD 744
            DL  ++GER   G   P+GF R +
Sbjct: 718 TDLIEWQGERASAGRLPPKGFPRTN 742