Pairwise Alignments
Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440
Subject, 884 a.a., DNA gyrase subunit A from Pseudomonas simiae WCS417
Score = 425 bits (1092), Expect = e-123
Identities = 285/779 (36%), Positives = 431/779 (55%), Gaps = 80/779 (10%)
Query: 16 SLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVG 75
++ D +Q+YL+Y+M VI+ RALP DGLKPV RR+++AMSELG D + +KKSAR VG
Sbjct: 12 NIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVG 71
Query: 76 DVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRY 135
DV+GK+HPHGD+A Y+ +V MAQPFS RY LVDGQGN+G+ D + AAMRYTE R+++
Sbjct: 72 DVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNA-AAMRYTEVRMTKL 130
Query: 136 AEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREV 195
A LL+++ + TVDWVPN+DGT PAV+P ++PN+L+NG++GIAVGMAT++PPHNL EV
Sbjct: 131 AHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEV 190
Query: 196 ASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVE 255
C+ L+D P+ T+++L ++I GPD+PT A I+ RA I++ Y +GRG I MRA +E
Sbjct: 191 IDGCLALIDNPELTVDELMQYIPGPDFPT-AAIINGRAGIIEAYRTGRGRIYMRARSIIE 249
Query: 256 DGD-------IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIP 308
D D IV+T LP+Q++ A+++E+IA ++ KKL + +LRDESD + R+VI
Sbjct: 250 DIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKDG-MRVVIEL 308
Query: 309 RSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRR 368
R V + ++ +L+A T L+S + +NV + +DGRP++ NL+ LL ++ R V RR
Sbjct: 309 RRGEVP-EVILNNLYAQTQLQSVFGINV-VALIDGRPRILNLKDLLEAFVRHRREVVTRR 366
Query: 369 LQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYP---KQALIE------------- 412
L K +R H+L+G A N+D VI +I+ P K+ALI
Sbjct: 367 TVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSAVVAMVE 426
Query: 413 ---------------------RFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQ 451
++ L+ QA ILE RL +L LE K+ E E+L +
Sbjct: 427 RAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQI 486
Query: 452 AKLQALLGSEAKLRKLVRSELIKDAETYGDDRRSPIV-ARAEAKALSENELMPTEPVTVV 510
+L +L S +L +++R EL YGD RR+ I+ AR + L+ +++P E V
Sbjct: 487 GELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLD---LTLGDMIPEEERVVT 543
Query: 511 LSEKGWVRCAK----------GHDIDATGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSY 560
+S G+ + G ATG+ K D S+ +L S G+ Y
Sbjct: 544 ISHGGYAKTQPLAAYQAQRRGGKGKSATGV--KDEDYIAHLLVANSHTTLLLFSSKGKVY 601
Query: 561 SLAAHSLPSA--RGQGEPLTGRLTPPPGATFECVLLPDDDAL--YVVASDAGYGFVVKG- 615
L + +P A +G PL L P + +LP ++ + + G V K
Sbjct: 602 WLKTYEIPEASRAARGRPLV-NLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP 660
Query: 616 -EDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQDWLAAVTTEGRLLVFKVSDLPQLGKG 674
E + G L L G V+ + D E++ + + G++ FK SD+ +
Sbjct: 661 LESFSRQRSVGLIALELDEG-DVLISAAITDGERE-VMLFSDGGKVTRFKESDV----RA 714
Query: 675 KGNKIIGVPGDRVASREEFVTDLAVIPEGATLVLQAGKRTLSLKADDLEHYKGERGRRG 733
G GV G R+ ++ ++ L IPE + +L A +R + E + +RG +G
Sbjct: 715 MGRTARGVRGMRLPEGQKLISML--IPEEGSQILTASERGYGKRTAISEFPEYKRGGQG 771
Score = 33.1 bits (74), Expect = 6e-05
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 541 AAAGRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATFECVLLPDDDAL 600
+AA + V++ S G + S A G+ + P G +L+P++ +
Sbjct: 685 SAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQ 744
Query: 601 YVVASDAGYGFVVKGEDLQAKNKAGKGLLSL---PNGAKVMTPRPVADREQDWLAAVTTE 657
+ AS+ GYG + + G+G++++ +++ V D E+ + ++ +
Sbjct: 745 ILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEE--IMLISDQ 802
Query: 658 GRLLVFKVSDLPQLGK----------GKGNKIIGVPGDRVASREEFVTDLAVIPEGATLV 707
G L+ +V+++ LG+ K K++G+ +RV E + E V
Sbjct: 803 GTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGL--ERVQEPSEVEGEELEGEEFEGEV 860
Query: 708 LQAG-----KRTLSLKADDLE 723
+ AG + TL AD+ E
Sbjct: 861 IAAGDDNVDEPTLDAAADEEE 881