Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

 Score =  389 bits (1000), Expect = e-112
 Identities = 240/625 (38%), Positives = 360/625 (57%), Gaps = 60/625 (9%)

Query: 22  EQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVGDVLGKF 81
           + +YL+Y+M VI+ RALP + DGLKPV RR++YAMS LG D +  +KKSAR VGDV+GK+
Sbjct: 18  KSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKSARVVGDVIGKY 77

Query: 82  HPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYAEVLLS 141
           HPHGDSA Y+ +V MAQPFS RY LVDGQGN+G+ D   S AAMRYTE R+S+ A  LLS
Sbjct: 78  HPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGD-SAAAMRYTEVRMSKIAHELLS 136

Query: 142 EVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACVR 201
           ++ + TVD+VPN+DGT Q P V+P R+PN+L+NG++GIAVGMAT++PPHNL EV + C+ 
Sbjct: 137 DLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHNLSEVINGCLA 196

Query: 202 LLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVEDG---- 257
            +D+   ++E L  HI GPD+PT A I+  +  I + Y +GRG + +RA   VE      
Sbjct: 197 YIDDENISVEGLMTHIPGPDFPT-AAIINGKRGIEEAYRTGRGKVYIRARAEVEADAKSG 255

Query: 258 --DIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRSNRVDV 315
              I+V  +P+QV+ A+++E+IA  ++ K++  ++ LRDESD +   RIVI  + + V  
Sbjct: 256 RETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG-MRIVIEIKRDAVG- 313

Query: 316 DELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRRLQHRLDK 375
           + ++ HL++ T ++ ++ +N+  +   G+P++  L+ +L  ++  R   V RR    L K
Sbjct: 314 EVVLNHLYSQTQMQVSFGINMVALH-QGQPKVMTLKEILAAFVRHRREVVTRRTIFELRK 372

Query: 376 VEKRLHLLDGLLTAFLNLDEVIHIIRTEEYP---KQALI--------------------- 411
             +R H+L+GL  A +N+D +I +IR    P   K AL+                     
Sbjct: 373 ARERAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSVASMLERAGDDAA 432

Query: 412 -------------ERFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALL 458
                        +R+ LTE QA  IL+ RL++L  LE  K+  E  ELL + A+L  +L
Sbjct: 433 RPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLGQIAELLFIL 492

Query: 459 GSEAKLRKLVRSELIKDAETYGDDRRSPIVARAEAKALSENELMPTEPVTVVLSEKGWVR 518
               +L +++R EL+   E Y D RR+ I     +  ++  +L+  E V V LS +G+V+
Sbjct: 493 RRPERLMEVIREELLAIREQYNDVRRTEIT--HNSADINIEDLISEENVVVTLSHQGYVK 550

Query: 519 CAKGHDIDA--------TGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSLPSA 570
                D +A        +    K  D         ++   +   S GR Y L  + LP A
Sbjct: 551 YQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWLKVYQLPEA 610

Query: 571 -RG-QGEPLTGRLTPPPGATFECVL 593
            RG +G P+   L   P      +L
Sbjct: 611 SRGARGRPIINLLPLEPDERITAIL 635