Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 876 a.a., Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  162 bits (410), Expect = 7e-44
 Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 54/457 (11%)

Query: 22  EQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVGDVLGKF 81
           ++ +L+Y+ YVI++RA+P I DG KPVQRRI++AM E+    D +  K A  +G  + ++
Sbjct: 27  QEWFLDYASYVILERAVPAIEDGFKPVQRRILHAMKEMD---DGRFNKVANIIGQTM-QY 82

Query: 82  HPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYA-EVLL 140
           HPHGD++  +A+V + Q    +  L++ QGNWG        AA RY EARLS++A EV+ 
Sbjct: 83  HPHGDASISDAIVNLGQ----KDLLIETQGNWGDIRTGDGAAAARYIEARLSKFALEVVF 138

Query: 141 SEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACV 200
           +     T DW  ++DG  +EP  LP + P +L  G  GIAVG++T + PHN  E+ +A V
Sbjct: 139 NPQ---TTDWQVSYDGRKREPVTLPVKFPLLLAQGVEGIAVGLSTKILPHNFCELINASV 195

Query: 201 RLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGR-GSIRMRAVYRVEDGD- 258
            +L   KA I         PD+PT        A+  +  E  R G I++RA  R+E+GD 
Sbjct: 196 DVLKGKKANIV--------PDFPTGG-----LADFSEYNEGLRGGKIKVRA--RIEEGDG 240

Query: 259 --IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRSNRVDVD 316
             +++  +P   +   +++ I       K+  +  + D +  +   ++ + P  +    D
Sbjct: 241 KSLLIKDIPFGTTTTSLIDSIIKANDKGKI-KIKKVVDNTAKDVEIQVFLAPGQS---PD 296

Query: 317 ELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRRLQHRLDKV 376
             +  L+A TD E +   N  +I +D +P    +  +L          ++R L+ R  ++
Sbjct: 297 MTIDALYAFTDCEQSISPNACVI-IDDKPVFMGVNDILAYNTTQTKALLKRELEIRKGEL 355

Query: 377 EKRLHLLDGLLTAFL------------NLDEVIHIIRTEEYPKQALIERFELTEIQADYI 424
            ++L L   L   F+              ++VI  I     P +    R E+T+     +
Sbjct: 356 MEKL-LFSSLEKIFIENRIYRDIEECETWEDVIDTIDKGLDPHKPDFYR-EITKDDIIRL 413

Query: 425 LETRLRQLARLEEMK----IRGEQDELLKEQAKLQAL 457
            E ++++++R +  K    +R  +DEL + +  L+ L
Sbjct: 414 TEIKIKRISRFDSFKADELMRKLEDELKEVEYNLEHL 450