Pairwise Alignments

Query, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 287 a.a., Flagellar motor rotation protein MotA from Sphingobium sp. HT1-2

 Score =  177 bits (448), Expect = 3e-49
 Identities = 102/288 (35%), Positives = 162/288 (56%), Gaps = 6/288 (2%)

Query: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQ--PFEVLIIGGAAFGAFLQANPGHMTMHVI 58
           M  IIG++V+   V GG++ + G I  ++   P E++IIGGAA GA +  N G     + 
Sbjct: 1   MFAIIGLVVLLGMVFGGFIFTGGDIGPVLHALPHEMIIIGGAAVGALIIGNSGSDLKALG 60

Query: 59  KKSMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLA 117
               K+F G ++    +L+ + LV +++   R EG +A+E  IED   SPIF +YP ++ 
Sbjct: 61  GGLGKVFKGPQYKKQDFLDCIFLVSKLMKTLRVEGPVALEPHIEDPGTSPIFGEYPKLMK 120

Query: 118 DERMTAFVCDYLR--IMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
           D+ +   + D LR  ++S+G + PH +E + D  L +   E   P+  + G+AD +P  G
Sbjct: 121 DKTLIHLISDTLRLVVVSSGTLDPHAVEEVMDNNLKTHHHEALKPADNLQGLADALPALG 180

Query: 176 IVAAVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
           IVAAVLG+V TM S+ D   + +G  +G+ALVGTF G+L AYG   P A       +++ 
Sbjct: 181 IVAAVLGVVKTMGSI-DQPPSVLGAMIGSALVGTFLGVLLAYGMVNPFANRCRAVIEQDG 239

Query: 236 NLYESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVRGR 283
            +Y  +K  ++AS  G P  L +E  R  L   ++P FAE+   +R +
Sbjct: 240 AIYHVVKQIIIASLHGHPQPLVIEAARSSLIHANQPGFAEVFDGMRNK 287