Pairwise Alignments

Query, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 286 a.a., flagellar motor stator protein MotA from Magnetospirillum magneticum AMB-1

 Score =  203 bits (516), Expect = 4e-57
 Identities = 109/281 (38%), Positives = 166/281 (59%), Gaps = 2/281 (0%)

Query: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKK 60
           M  IIGI+V F SV+GGY    G ++ L QPFE LII GAA G+ L  NP  + + + K 
Sbjct: 1   MFAIIGIVVTFVSVIGGYAAPGGHLSVLFQPFEWLIIIGAAVGSLLLGNPKTIIIGISKN 60

Query: 61  SMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLADE 119
              +F G+      Y+E+L ++Y +   ++ +G +A+E+ +E    SP+F K+P   +D 
Sbjct: 61  LGLVFKGAHHGKDDYIELLSVLYAVFKLAKTKGDLALESHVEKPDESPLFGKFPKFSSDH 120

Query: 120 RMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAA 179
               F CDYLR+++ G    HELE + D EL +  +     +HAV  + D MP  GIVAA
Sbjct: 121 HTRTFFCDYLRLLTLGTSNAHELESIIDGELEAHHKHYHEIAHAVNLMGDAMPALGIVAA 180

Query: 180 VLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYE 239
           VLG++ TM S+ +  +  +G  +GAALVGTF G+L +Y F  P+A+ ++     +   + 
Sbjct: 181 VLGVIHTMGSITEPPE-VLGHLIGAALVGTFSGVLISYAFIAPIARNMQLCFDSDHYYFL 239

Query: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAV 280
           +IKA L+    G  P +++EF RK+L  + RP+F ELE+ V
Sbjct: 240 AIKAGLLGHMQGYAPQVSIEFARKILPDELRPTFQELEETV 280