Pairwise Alignments

Query, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 376 a.a., flagellar motor protein MotB from Dickeya dianthicola ME23

 Score =  234 bits (596), Expect = 3e-66
 Identities = 144/364 (39%), Positives = 200/364 (54%), Gaps = 51/364 (14%)

Query: 1   MENNQPIIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           M++  PII K+ K     HHGG+WKIA+ADF TAMMA FLV+WL++ ++P Q   IA YF
Sbjct: 1   MKHQHPIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYF 60

Query: 61  QDPIGFSESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERE 120
           +         TP  I +   P+++      P   ++PTQQ      K Q++TM  ++E  
Sbjct: 61  R---------TPLKIAITSGPKISDASNPIPGGGSDPTQQEGDV--KRQIDTMDGRLEEI 109

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180
           +L  L + L   ++ +P+L+  +  +L E+  +GLRIQI+D+ NRPMF  GSA+++PY  
Sbjct: 110 KLNKLRERLDQLIDADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMS 169

Query: 181 DILLAMADTIKAVPNKVSISGHTDAKPYA-GTGEYGNWELSANRANAARRALVAGGYPDG 239
           DIL A+A  +  +PNK+S+SGHTD   YA G   Y NWELSA RANA+RR L+ GG  +G
Sbjct: 170 DILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSNWELSAERANASRRELIIGGLAEG 229

Query: 240 QVARVVGYASS-SLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGE---------------- 282
           +V RVVG A + +L   K   + +NRRI ++VL K+AQ NIE E                
Sbjct: 230 KVLRVVGMADTMNLKQAKGGSDAINRRISLVVLNKQAQENIERENAESSAINIDKIENLQ 289

Query: 283 -----QGAPETPPA---------APTAPAAPASGA------APGASAPADPGATEQAPMQ 322
                +  P T PA          P     PASG+      AP  +APA       AP  
Sbjct: 290 NMGVDKSKPATAPADNGNSTATPPPETNGTPASGSTVAPAQAPATTAPA--SGANGAPTT 347

Query: 323 PREL 326
            R L
Sbjct: 348 GRRL 351