Pairwise Alignments

Query, 343 a.a., Putative ribosome biogenesis GTPase RsgA from Pseudomonas putida KT2440

Subject, 319 a.a., Ribosome small subunit biogenesis RbfA-release protein RsgA from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 5e-37
 Identities = 109/334 (32%), Positives = 157/334 (47%), Gaps = 28/334 (8%)

Query: 19  GERAARAAKREQ-HALQELEGGDLGPEQLGLVIAHFGVQVEVEAQDGETAGQVFRCHLRA 77
           G RAA AA      ALQ+           GLV+A  G    VE   GE       CH R 
Sbjct: 5   GRRAAPAAAASAAKALQD-----------GLVVASHGRHCLVETPTGER----LICHPRG 49

Query: 78  NLPALVTGDRVVWRAGNQGIGVIVAQMPRSTELCRPNNHGQLKPVAANVDLIVIVFAPAP 137
                V GDRV W+A ++  G I   +PR     R +   + K  AAN+D ++I+ A  P
Sbjct: 50  KKSQAVVGDRVHWQA-SEDEGTIEQVLPRRNLFYRQDEI-RTKSFAANLDHVLILIAAEP 107

Query: 138 EPHPNLIDRYLVAAEHAGLRPLLLLNKADLINDENGPGLHALLEVYRELGYPLLEVS--A 195
           E   + + R L+AAE   ++P++ LNK+DL+  E      A L  YR + + +L +S  A
Sbjct: 108 EFSEHQLARALIAAEAERIQPIIALNKSDLV--EPFERAWAKLAPYRRMHHGVLPLSLKA 165

Query: 196 HHGDGMQRLQQQLDGHISVFVGQSGVGKSSLVNSLLPDAGTRVGDLSEWSGQGTHTTTTA 255
                   L + L G  ++ +G SG GKS+L N L+P A     ++S+    G HTTT+ 
Sbjct: 166 SGEADYASLMKLLSGKSTLVLGPSGSGKSTLTNLLVPGASVLTQEISQALNSGKHTTTST 225

Query: 256 RLYHFPNG--GDLIDSPGIREFGLGHVSRDDVEDGFIEFRDLFGTCRFRDCKHDREPGCA 313
             Y         LIDSPG +EFGL H++   +     +  +    C+F +C H  EPGC 
Sbjct: 226 TWYWIDEARTTGLIDSPGFQEFGLNHIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCG 285

Query: 314 LL----KALEEGRIKPQRMNSYRSIIASLAEDSY 343
           ++     A   G I   R   Y  + A L++  Y
Sbjct: 286 VIANVASADGTGAISASRYKIYGELFAELSQKRY 319