Pairwise Alignments

Query, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 436 a.a., N-acetylmuramoyl-L-alanine amidase AmiC from Xanthobacter sp. DMC5

 Score =  205 bits (521), Expect = 3e-57
 Identities = 141/392 (35%), Positives = 202/392 (51%), Gaps = 21/392 (5%)

Query: 21  ALAVTQVKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDINGATLAAPLNVATS 80
           ALA    +  RL      TRL+ DL        FTL+ P R+++D++  T A   +    
Sbjct: 49  ALAPALAREARLAGDAKRTRLIVDLDRAPAFRAFTLANPPRVILDLSDVTFALKPDAGQL 108

Query: 81  NTP-ISSVRSAQRTPTDLRVVVDLKKSVT-PKSFTLAPNAQYGNRLVVDLYDQEADAIAA 138
               +++ R     P   R+V+++   V   K+F L        RLVVDL   +ADA A 
Sbjct: 109 RRGLVTAYRFGVFAPGKARMVLEVSGPVAIDKAFVLDAVDDQPARLVVDLVKADADAFAR 168

Query: 139 SAPPPAPAPVQTPATTPAVPVTPAQPAIKLPPVPSGKRDIVVAIDAGHGGEDPGASGSRG 198
           S    A      PA   A P             P+G    V+ ID GHGG D G SG   
Sbjct: 169 SIATEAEQRTALPAAAVAAP-------------PAGDTRPVIVIDPGHGGIDSGTSGYSA 215

Query: 199 QHEKDIVLQIAKELQRQINSEKGFRAELTRTGDYFIPLRKRTEIARKKGADLFISIHADA 258
             EK IVL+ A  L+ ++    G+R  LTR+ D FIPL  R  IAR   ADLFISIHADA
Sbjct: 216 FVEKTIVLETALALRERLEKAGGYRVVLTRSTDTFIPLADRVRIARTNRADLFISIHADA 275

Query: 259 AP--SRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDKDRMLAGVLLD 316
                  A GASV+ LS+  + +E+A  LAD EN++DLI G   V L D+   +AG+L+D
Sbjct: 276 LARGDGRARGASVYTLSETASDTESAH-LADKENKADLIAG---VDLSDETDEVAGILVD 331

Query: 317 LSMTATLSSSLNVGQKVLGNMGRVTSLHKQRVEQAGFMVLKSPDIPSILVETGFISNNNE 376
           L+   T + S    + ++G+M   T +H   ++ AGF VL++ D+PS+LVE G++S+ ++
Sbjct: 332 LAQRETRNFSALFARTLVGSMKAATRMHGTPLKSAGFRVLRAHDVPSVLVELGYMSSPDD 391

Query: 377 AAKLASSSHQQALARSIRTGVHQYFQQNPPPG 408
             +L S + +  +A +I  GV Q+F      G
Sbjct: 392 LKQLTSEAGRDRMADAIAAGVTQFFAHKGAAG 423