Pairwise Alignments

Query, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 400 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

 Score =  379 bits (974), Expect = e-110
 Identities = 201/397 (50%), Positives = 273/397 (68%), Gaps = 24/397 (6%)

Query: 21  ALAVTQVKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDINGATLAAPLN-VAT 79
           A   TQ+ + RLWR+ +  RLVFDLSGPVQ+  FTLSAP+RL+ID++GA L+   + +A 
Sbjct: 21  AAHATQISNARLWRSDEKLRLVFDLSGPVQYKTFTLSAPERLIIDLSGAGLSGDFSQLAL 80

Query: 80  SNTPISSVRSAQRTPTDLRVVVDLKKSVTPKSFTLAPNAQYGNRLVVDLYDQEADAIAAS 139
            N+ I+S+RS      D R+V+DL   +   SF L P    G+RLV+DL          +
Sbjct: 81  KNSGITSIRSGHFGKGDTRIVLDLAAPMQLNSFLLPPQDGQGHRLVLDL----------T 130

Query: 140 APPPAPAPVQTPATTPAVPVTPAQPAIKLPPVPSGKRDIVVAIDAGHGGEDPGASGSRGQ 199
           +   AP  +   A  P   V  A P          KRDI+V +D GHGG+DPGA GS+GQ
Sbjct: 131 SATQAPRQI---AAEPKPLVDKAHP----------KRDIIVVVDPGHGGKDPGAVGSKGQ 177

Query: 200 HEKDIVLQIAKELQRQINSEKGFRAELTRTGDYFIPLRKRTEIARKKGADLFISIHADAA 259
            EKD+VL IA+ L +++  EKGF  +L R  D+F+PLRKR EIA K  AD+FIS+HADAA
Sbjct: 178 REKDVVLSIAQLLAKRLKREKGFDVKLVRNDDFFVPLRKRVEIAHKHNADMFISVHADAA 237

Query: 260 PSRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDKDRMLAGVLLDLSM 319
           P   A GASV+ALS+ GATS TAR++A  EN +DL+G    ++L DKD MLAGV+LD+SM
Sbjct: 238 PRVTASGASVYALSEGGATSATARFMAQRENGADLLGATRLLNLKDKDPMLAGVILDMSM 297

Query: 320 TATLSSSLNVGQKVLGNMGRVTSLHKQRVEQAGFMVLKSPDIPSILVETGFISNNNEAAK 379
            AT++SSL +G  +LG++  +TSLH++RVEQAGF VLKSPD+PSILVETGFISN  ++A+
Sbjct: 298 NATIASSLQLGNSILGSLEGITSLHQRRVEQAGFAVLKSPDVPSILVETGFISNARDSAR 357

Query: 380 LASSSHQQALARSIRTGVHQYFQQNPPPGTYIAWLRD 416
           L ++ HQQA+A  +  G+ +YFQ+NPP  +Y+AW+++
Sbjct: 358 LVTARHQQAVADGLFEGLKKYFQKNPPMNSYMAWVQE 394