Pairwise Alignments
Query, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440
Subject, 496 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Variovorax sp. SCN45
Score = 275 bits (704), Expect = 2e-78
Identities = 175/461 (37%), Positives = 239/461 (51%), Gaps = 84/461 (18%)
Query: 27 VKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDINGATLAAPLN-----VATSN 81
+ ++R+W A D TR+ + + + +P RL +DI G L L + +
Sbjct: 32 ILAVRVWPAADYTRVTIESDARLNSQQLVVGSPPRLAVDIEGIDLNPELRELVGKIKPGD 91
Query: 82 TPISSVRSAQRTPTDLRVVVDLKKSVTPKSFTLAPNAQYGNRLVVDLYDQEA-------- 133
I+ +R Q P +R+V DLK++V P+ F+LAP A Y +RLV+DLY ++A
Sbjct: 92 PYINGLRVGQNAPKVVRIVFDLKQAVVPQVFSLAPVAAYKHRLVLDLYPEQAVDPMEALI 151
Query: 134 ----------------DAIAASAP--------------------------PPAP------ 145
A+A P PP P
Sbjct: 152 AERLRDAPRTPQQGGNPAVAGIVPSTPTAPAGDPLGDLMAQQSMRPGPQTPPPPVVAGID 211
Query: 146 ---APVQTPATTPAVPVTPAQPAIKLPPVPSGK------------RDIVVAIDAGHGGED 190
APV P V P +P PP P R I+VA+D GHGGED
Sbjct: 212 RPTAPVIVAPPPPVVGTAPVRPIAPSPPPPVAAPRGGPATASRTDRIIIVALDPGHGGED 271
Query: 191 PGASGSRGQHEKDIVLQIAKELQRQINSEK----GFRAELTRTGDYFIPLRKRTEIARKK 246
PGA G G EKDIVLQ+A L+ +IN+ RA LTR D+F+PL R + AR+
Sbjct: 272 PGAIGPNGTREKDIVLQVAHRLRERINAGSVNGSPMRAFLTRDADFFVPLGVRVQKARRV 331
Query: 247 GADLFISIHADAAPSRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDK 306
ADLF+SIHADA + AA GASVFALS GA+S ARW+A+ EN +D +GG V++
Sbjct: 332 QADLFVSIHADAFTTPAARGASVFALSQSGASSSAARWMANKENEADKVGG---VNVGGH 388
Query: 307 DRMLAGVLLDLSMTATLSSSLNVGQKVLGNMGRV-TSLHKQRVEQAGFMVLKSPDIPSIL 365
+ + LLD+S TA ++ SL +G +LG + + LHK +VEQAGF VLK+PDIPS+L
Sbjct: 389 EAQVQRALLDMSTTAQINDSLKLGGAMLGEIKNIGARLHKGQVEQAGFAVLKAPDIPSVL 448
Query: 366 VETGFISNNNEAAKLASSSHQQALARSIRTGVHQYFQQNPP 406
VET FISN E A L +Q++LA ++ G+ +YF QNPP
Sbjct: 449 VETAFISNPEEEANLRRVDYQESLADALMRGIQRYFAQNPP 489