Pairwise Alignments

Query, 86 a.a., RNA-binding protein Hfq from Pseudomonas putida KT2440

Subject, 80 a.a., putative RNA-binding protein Hfq from Agrobacterium fabrum C58

 Score = 79.0 bits (193), Expect = 1e-20
 Identities = 38/78 (48%), Positives = 60/78 (76%), Gaps = 4/78 (5%)

Query: 3  KGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGSIESFDQFVVLL-KNTVSQMVYKHAIST 61
          +  +LQD +LNT+RK+K+ ++I+L+NG+KL G + SFD F VLL ++  SQ+VYKHAIST
Sbjct: 4  RSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAIST 63

Query: 62 VVPARPVRLPSPTDSEHG 79
          ++P +P+++    +SE G
Sbjct: 64 IMPGQPMQM---FESEEG 78