Pairwise Alignments

Query, 644 a.a., putative methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 644 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  967 bits (2501), Expect = 0.0
 Identities = 514/644 (79%), Positives = 584/644 (90%)

Query: 1   MSAILSLLRSRLLRPVFVALGIALLVQVLVAVALTRSTVTALEADLGERLGNDSRQLASD 60
           MSA+LSLL+SRLLRPVFV LGIALLVQVLVAVALTRSTVTALEADLG RLG DS++L+++
Sbjct: 1   MSAVLSLLQSRLLRPVFVTLGIALLVQVLVAVALTRSTVTALEADLGNRLGIDSQKLSAE 60

Query: 61  LEQAGQDVRSGLDGLSSSTRQRLSAGLSERLQSEQQQLRSTLEKNLKDSANDMAELLASV 120
           L QAG++V S LD LS+STRQRL+AGLS RLQ EQ+QLR+TLEK+L+DSANDMA+LLASV
Sbjct: 61  LAQAGKEVTSSLDSLSTSTRQRLTAGLSTRLQEEQKQLRATLEKDLQDSANDMAQLLASV 120

Query: 121 APRAIWDNDVPVLSDFARRAQRNPNVLFVIYDDAQGQHLTRYLNRQNPINQTLIEKGQGE 180
           APRA+WD+DVP LS+FARRAQRNPNVLFV+YDDA G+HLTRYLNR+NPINQ L+EKG+G+
Sbjct: 121 APRAMWDSDVPTLSEFARRAQRNPNVLFVVYDDAAGEHLTRYLNRENPINQALLEKGKGD 180

Query: 181 RALDKVLDAARRDPLVYFVEASINPNGAEIGKVLMGVSTAGIDQELKALDQRFSALIASG 240
           RALDKVL+AA+ DP V++VEASI+PNG EIGKV MGVSTA ++ +L ALD+RF+ALIASG
Sbjct: 181 RALDKVLNAAKDDPSVFYVEASISPNGVEIGKVRMGVSTAAVEADLVALDKRFAALIASG 240

Query: 241 EQLVGDSLGAAAADSGKALRERLEVAQASATAMQANTAQTVRDAAAELRWRIGLGLVVVG 300
           +QLVGDSL  AAADS  A+  RL+ AQA+AT M ANT   V+DAA  LRWRIG+GL +VG
Sbjct: 241 DQLVGDSLKGAAADSAAAMGARLQSAQATATQMTANTTGAVQDAAGTLRWRIGMGLALVG 300

Query: 301 LGVLLVVALVLGRRVLSKLRLLIAALNDLAAGEGDLTKRVTLDSRDEIGDMASAVNRFVD 360
           LGVLL++A+VLGRRV+++L+LLIAA++DLAAGEGDLTKRV + S+DEIGDMASAVNRFVD
Sbjct: 301 LGVLLLIAIVLGRRVVNRLKLLIAAMDDLAAGEGDLTKRVQISSKDEIGDMASAVNRFVD 360

Query: 361 KLQPIVREAGEVAQRTGVEIGAMAQRNAGADAAAALQRDEVAASLRDLSSMADEAQAESH 420
           KLQPIVREAG+VAQRTGVEIGAM  RNAGADAAA LQRDEVA SLR LS MADEAQAESH
Sbjct: 361 KLQPIVREAGDVAQRTGVEIGAMTLRNAGADAAAGLQRDEVAESLRALSQMADEAQAESH 420

Query: 421 AMQAALQQVVDIRQATDENSRSSTQLASLIENLAGQVETGSQVIERLAKQSEQIEVVLTV 480
           AMQAALQQVVDIRQATDENSR+S ++ SLIE LAGQV+ GSQVIERLA+QSEQIEVVLTV
Sbjct: 421 AMQAALQQVVDIRQATDENSRTSAEVGSLIEALAGQVQAGSQVIERLAQQSEQIEVVLTV 480

Query: 481 IHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGDIQAHITALQKG 540
           IHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGDIQAHI ALQ+G
Sbjct: 481 IHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGDIQAHIVALQQG 540

Query: 541 AKEAVATISQAGLKASEGLLVLRDNERRQQSVQAAVEQVHAAIGLATRAAEQQAHGAQAV 600
           A+EAV TI +AG +ASEGLLVLRD+ R QQ+VQA+VEQVHAAIGLATRAAE QA GA AV
Sbjct: 541 AREAVDTIGKAGRQASEGLLVLRDSVRLQQTVQASVEQVHAAIGLATRAAEHQAQGAHAV 600

Query: 601 RGRVENIHAQAERSAEVVMQTTASSKVLDDLAAQLRASLGQFRA 644
           RGRVE IHAQAER+A+ V +TTAS KVLD LAAQL+ASLGQFRA
Sbjct: 601 RGRVEVIHAQAERAAQAVQETTASGKVLDGLAAQLKASLGQFRA 644