Pairwise Alignments

Query, 644 a.a., putative methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  200 bits (509), Expect = 1e-55
 Identities = 134/358 (37%), Positives = 198/358 (55%), Gaps = 16/358 (4%)

Query: 294 LGLVVVGLGVLLVVALVLGRRVLSKLRLLIAALNDLAAGEGDLTKRVTLDSRDEIGDMAS 353
           LG+ VV L V+  V ++L   +L  L L+ A L+D+AAGEGDLT+R+ + S+DE+GD+A 
Sbjct: 209 LGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAG 268

Query: 354 AVNRFVDKLQPIVREAGEV-AQRTGV--EIGAMAQRNAGADAAAALQRDEVAASLRDLSS 410
           A NRFVDK+  +VR+  E+ +Q TG+  ++   AQR+  A      + D+VA ++  +SS
Sbjct: 269 AFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSS 328

Query: 411 MADEAQAESHAMQAALQQVVDIRQATDENSRSSTQLA----SLIENLAGQVETGSQVIER 466
            A E    +     A QQ       TD   +++ ++     + I  L   + +    ++ 
Sbjct: 329 AAQEVARSAQGASVAAQQ-------TDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDS 381

Query: 467 LAKQSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSS 526
           L +    I  VL+VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALAS+TQ+S
Sbjct: 382 LQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTS 441

Query: 527 TGDIQAHITALQKGAKEAVATISQAGLKASEGLLVLRDNERRQQSVQA-AVEQVHAAIGL 585
           T +IQ  I  LQ G + AV  + ++   A +G     +         A  +  +++    
Sbjct: 442 TQEIQGMIDRLQTGTEAAVEAMRRSS-DAGDGTSAQANEAGASLDTMAQLIGTINSMNAQ 500

Query: 586 ATRAAEQQAHGAQAVRGRVENIHAQAERSAEVVMQTTASSKVLDDLAAQLRASLGQFR 643
              AAE+Q   A+ +   V  I    +  A+       +S+ L +L  +L   +GQFR
Sbjct: 501 IASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFR 558