Pairwise Alignments

Query, 857 a.a., exoribonuclease R from Pseudomonas putida KT2440

Subject, 861 a.a., putative transcriptional accessory protein from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 2e-09
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 658 EFMKD-RVGETFPGVITAVTGFGLFVELTDIYVEGLVHVSALPGDYYHFDPVHHRLAGER 716
           E +KD   G    GV+T VT FG FV++  ++ +GLVH+SAL   +   DP         
Sbjct: 728 EDLKDLEPGMILEGVVTNVTNFGAFVDI-GVHQDGLVHISALSEKFVK-DP--------- 776

Query: 717 TGRSFRLGDTIEVKVMRVDLDERKI--DFEVSEKTLAAPIGRKQRGAAPVAEKAEQQPAT 774
              + + GD ++VKVM VD+  +++     +S+       G +         + +Q P  
Sbjct: 777 -REAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKVEGNRGGNRGNGGNRQQQAPRQ 835

Query: 775 EAKATPKPRSRKSEA 789
              AT  P +    A
Sbjct: 836 RETATAAPANNAMAA 850