Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

Subject, 268 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Xanthobacter sp. DMC5

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 23  RVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVE-GVHQGVVA--EVSPSQ 79
           R+  + LS+ ++E RL  L+A   E+ +PV  A +  MDA V   +H+G++A     P  
Sbjct: 53  RLSSVLLSQAQAE-RLPDLIAQLPED-LPVHVAPQAVMDAIVGFHIHRGILALGAARPLP 110

Query: 80  VWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPV 139
             G L     L+      L++   G+T+  N+G   R A A GA AVI+ +   A+  P+
Sbjct: 111 EAGTL-----LDGLGPRALVVAALGLTNHDNMGGIFRNAAAFGADAVILDE---ASCDPL 162

Query: 140 VRK---VACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEIYQQDLTGPLVMI 196
            RK   V+ GA+ V+P   V +    +  L  RG   V  +    + + +      +  +
Sbjct: 163 YRKAIRVSVGASLVVPFARVPDAGVLIALLAARGFEAVALSPSGRETLSRLTRPPRVAAL 222

Query: 197 MGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCL 237
            G EG G+           V +PMA    SLNV+  +G+ L
Sbjct: 223 FGTEGPGLPDAVMARVR-TVAIPMAEGFDSLNVATTSGIVL 262