Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

Subject, 258 a.a., rRNA methylase, putative, group 3 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  136 bits (343), Expect = 4e-37
 Identities = 82/239 (34%), Positives = 133/239 (55%), Gaps = 3/239 (1%)

Query: 7   IYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVEG 66
           I+G  AV   L H  K + +I +++  +   ++ LL+ A + RVPV +    +++     
Sbjct: 20  IFGTRAVMEAL-HAQKDIDKILVNKELNNDLIKELLSQAKQERVPVVRVPEAKLNRITRK 78

Query: 67  VHQGVVAEVSPSQVWG-ELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATA 125
            HQGVVA +S  Q    + ++ E   +    PL+LVLD +TD  N GA  RTA+ AG  A
Sbjct: 79  NHQGVVAHMSAIQYASIDNVITECFSKG-VDPLVLVLDRITDVRNFGAIARTAECAGVHA 137

Query: 126 VIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEIY 185
           +++P+  +A +     K + GA   +P+    NL   ++ L++ GL +V    + E+++Y
Sbjct: 138 IVIPEKGAAQINSDAVKTSAGALNFLPVCRAKNLHFMVKDLKKMGLNIVSCTEKTERKMY 197

Query: 186 QQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQR 244
             D T P  +IMG+E  G+        D  V +PMAG++ SLNVSVA+GV ++E +RQR
Sbjct: 198 DADFTVPTAIIMGSEEDGISEDLMALSDEFVSIPMAGNIESLNVSVASGVLIYEIIRQR 256