Pairwise Alignments

Query, 287 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 297 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  293 bits (750), Expect = 3e-84
 Identities = 160/297 (53%), Positives = 203/297 (68%), Gaps = 10/297 (3%)

Query: 1   MRALASFIMRGRVQATLVVVISAVLPLLFWLSAAAGSLVLLRRGFKDATSVIAGGLLAGL 60
           MRALA FIMRGRVQATLVV   A LPLL+WL AAAG LVLLRRG +DA  V+A G++A L
Sbjct: 1   MRALAEFIMRGRVQATLVVAGCAALPLLYWLGAAAGCLVLLRRGLQDAIGVLALGVVAAL 60

Query: 61  AVWV-MGDPITFLVIAGALALAAMLRAEHPWSRVLLASAVFAVAFSLVLDLALAQTFDVL 119
             W+ +G+P   LV+ G+ +LA +LRA   W R LL S    + FS+++D A     + L
Sbjct: 61  IWWLQLGEPKVLLVLLGSSSLALVLRASESWVRTLLVSVALGLVFSVLIDAAFRPQIEAL 120

Query: 120 AKAFAEAMPKIEGQ--PVLSGE-------LIRPVLVASTAVTVQLFSVLALMLARYWQAA 170
           ++   + +P   G+    LS E       LI P L+   AV +Q+ S+L+LML RYWQA 
Sbjct: 121 SQEIVKILPMALGELYQQLSVEERARLATLIAPALIGLMAVMMQIVSLLSLMLGRYWQAL 180

Query: 171 LYNPGGFGREFRELKLPKQTMAVLVAVMVVAPFIGPQFIILASASSLVLVLAGIALMHGL 230
           LYNPGGFGREFR +++P     +L+A+MVV P+ G    +L    S+ LV +G+ALMHGL
Sbjct: 181 LYNPGGFGREFRSIRIPVGPAMLLLALMVVGPYFGSHAALLVLFCSVPLVFSGLALMHGL 240

Query: 231 VAQGRLAGFWLVGMYVTLPLIMQLIYPLLMVLAIVDSLIDFRGRKSPPGKDSANGEG 287
           VAQ RLA FWLVGMYVT+ + MQLIYPLL+VLAIVD LIDFRGR +P   D+ANGEG
Sbjct: 241 VAQKRLAKFWLVGMYVTMLVFMQLIYPLLVVLAIVDGLIDFRGRLAPKDADNANGEG 297