Pairwise Alignments

Query, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

Subject, 468 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Variovorax sp. SCN45

 Score =  477 bits (1227), Expect = e-139
 Identities = 238/452 (52%), Positives = 324/452 (71%), Gaps = 3/452 (0%)

Query: 11  DLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLAD 70
           D Q A L++PPHSIEAE +VLGGL+LDN AW+R+ D + DGDFYRH+H+LI+ A+  L +
Sbjct: 15  DRQIAQLRIPPHSIEAESSVLGGLLLDNGAWDRMGDLLVDGDFYRHEHKLIYAAIGGLIN 74

Query: 71  ANQPFDVVTLHEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLIS 130
           A++P DV+T++EQL   G + ++GGL YL  LA+  PS +NI+ YA I+RER+ LR+L+S
Sbjct: 75  ASKPADVITVYEQLQNLGKADEIGGLVYLNSLAQYVPSASNIRRYAEIVRERSILRKLVS 134

Query: 131 ISTDIADNAFNPQGRNAAEILDDAERQIFQIAE--ARPKTGGPVGVNELLTMAIDRIDTL 188
            + +IA  AFNPQG+   +ILD+AE++IF I E   R K G    ++ L+   +DR+  +
Sbjct: 135 AADEIATQAFNPQGKQVDKILDEAEQKIFNIGEEGTRMKQGFQ-SMDALVVELLDRVTEM 193

Query: 189 FNSDSDITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVL 248
             + +DITGI TG+ D D+ TSGLQ  D+I++A RPSMGKT+ A+N+ E+  L     V 
Sbjct: 194 AENPNDITGIRTGFHDFDKMTSGLQPGDMIVLAARPSMGKTSLAINIAEHVALEEGLPVA 253

Query: 249 VFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGI 308
           VFS+EM    L +R++ S+GRIDQ  +R+G+L D++WPRLT A+  L    L ID+T G+
Sbjct: 254 VFSMEMGASQLAVRIVGSIGRIDQGHLRTGKLSDEEWPRLTEAIEKLRTVSLHIDETPGL 313

Query: 309 SPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFNC 368
           S SE+RA  RRLAR++G + +I+VDYLQLM    S  +NR   + EISR LK LAKE  C
Sbjct: 314 STSELRANARRLARQYGRLGLIVVDYLQLMSTSSSGDENRATAVGEISRGLKMLAKELKC 373

Query: 369 PVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEHKGVAEII 428
           PVIALSQL+R +E R +KRP+ SDLRESGAIEQDAD+IMF+YRD+ Y   ++  GVAE+I
Sbjct: 374 PVIALSQLSRGVESRTDKRPMMSDLRESGAIEQDADIIMFIYRDDYYDKNSKEPGVAEVI 433

Query: 429 IGKQRNGPIGFVRLAFIGKYTRFENLAPGMYN 460
           I K RNGP G V+LAF+   T+FENLA   +N
Sbjct: 434 ISKHRNGPTGTVKLAFLKPITKFENLASYSHN 465