Pairwise Alignments

Query, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

Subject, 471 a.a., Replicative DNA helicase (EC 3.6.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  550 bits (1418), Expect = e-161
 Identities = 278/464 (59%), Positives = 361/464 (77%), Gaps = 7/464 (1%)

Query: 5   TTSEQLDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRA 64
           T +   D Q A +KVPPHSIEAEQ+VLGGLMLDN  W+ V ++V   DFY   HR IF  
Sbjct: 12  TDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTE 71

Query: 65  VHKLADANQPFDVVTLHEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERAT 124
           + +L ++  P D++TL E L+++G    VGG AYLAEL+KNTPS ANI AYA I+RERA 
Sbjct: 72  MGRLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAV 131

Query: 125 LRQLISISTDIADNAFNPQGRNAAEILDDAERQIFQIAEARP-KTGGPVGVNELLTMAID 183
           +R +I+++ +IAD  ++PQGRN+ E+LD AE ++FQIAE R  K  GP  ++++L   + 
Sbjct: 132 VRDMIAVAHEIADAGYDPQGRNSDELLDLAESRVFQIAENRANKDEGPKSIDQILDATVA 191

Query: 184 RIDTLFNSDSD-ITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLR 242
           RI+ LF    D +TG+ TGY DL++KT+GLQ +DLIIVA RPSMGKTTFAMNL ENA + 
Sbjct: 192 RIEQLFQQPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMNLCENAAML 251

Query: 243 TDKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVN-LLNDRKLF 301
            DK VL+FSLEMPGE ++MRML+SL R+DQT++R+GQLDD+DW R++  +  LL  R ++
Sbjct: 252 QDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMY 311

Query: 302 IDDTAGISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKA 361
           IDD++G++P+E+R+R RR+ REHG +++IM+DYLQLM++P S  DNRT EI+EISRSLKA
Sbjct: 312 IDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVP-SLSDNRTLEIAEISRSLKA 370

Query: 362 LAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEH 421
           LAKE   PV+ALSQLNRSLEQR +KRPVNSDLRESG+IEQDAD+IMF+YRDEVYH  ++ 
Sbjct: 371 LAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDL 430

Query: 422 KGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE 465
           KG+AEIIIGKQRNGPIG VRL F G+++RF+N A   Y   DDE
Sbjct: 431 KGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQY---DDE 471