Pairwise Alignments

Query, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

Subject, 498 a.a., replicative DNA helicase from Agrobacterium fabrum C58

 Score =  305 bits (781), Expect = 2e-87
 Identities = 178/468 (38%), Positives = 266/468 (56%), Gaps = 34/468 (7%)

Query: 21  PHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLADANQPFDVVTL 80
           P++IEAEQA+LG ++++N+A+ RV D +     Y   HR IF     +    +  + VT+
Sbjct: 22  PNNIEAEQALLGAILVNNDAYYRVSDFLKPVHLYEPLHRKIFEVAGDIIRMGKTANPVTI 81

Query: 81  HEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAF 140
              L  +     +    YLA LA    S+ N + Y   I + A  R LI I  D+ + A+
Sbjct: 82  KTFLPADDKIGDLTVAQYLARLAAEAVSIINAEDYGRAIYDLALRRALIQIGEDVVNIAY 141

Query: 141 N-PQGRNAAEILDDAERQIFQIAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGIS 199
           + P        ++D ER++F++AE     GG    N+ + +AID     F  D +++GIS
Sbjct: 142 DAPLDMPPQAQIEDTERRLFELAETGRYDGGFQSFNDAVALAIDMAGAAFERDGNLSGIS 201

Query: 200 TGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVL----------- 248
           TG   LD +  GLQ +DLI++AGRP MGKT+ A N+  N     ++ V            
Sbjct: 202 TGIHSLDGRMGGLQRSDLIVLAGRPGMGKTSLATNIAYNIAASYEQEVQPDGSFKAKNGG 261

Query: 249 ---VFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDT 305
               +SLEM  E L  R++S    +  +K+R G + + D+ +L +   ++    L+ID T
Sbjct: 262 VVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGDITEADFEKLIACSQMMQKVPLYIDQT 321

Query: 306 AGISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKE 365
            GIS +++ AR RRL R+ G + +++VDY+QLM   G +G+NR  EI++I+  LKAL KE
Sbjct: 322 GGISIAQLSARARRLKRQRG-LDVLVVDYIQLMTGAGKSGENRVQEITQITTGLKALGKE 380

Query: 366 FNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEH---- 421
            N P+IALSQL+R++E R +KRP  SDLRESG+IEQDADV++FV+R+E Y    E     
Sbjct: 381 LNVPIIALSQLSRAVENREDKRPQLSDLRESGSIEQDADVVLFVFREEYYVKNMEPRDIS 440

Query: 422 --------------KGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLA 455
                         KG A++II KQR+GP G V+LAF  ++TRF +LA
Sbjct: 441 DPKYAEWEALFDKVKGTADVIIAKQRHGPTGTVKLAFQSEFTRFADLA 488