Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 305 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  325 bits (834), Expect = 6e-94
 Identities = 165/303 (54%), Positives = 229/303 (75%), Gaps = 2/303 (0%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA-YFG 62
           +FLQQL+NGLTLGS+YGLIAIGYTMV+GIIGM+NFAHG+V+M+SA++A I + LL    G
Sbjct: 3   VFLQQLINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSAFIALICVLLLTTVVG 62

Query: 63  VESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQIS 122
           + S  L++  TL+  ++ TG+  +TIER+AY+PLR S RLAP+ISAIG+S++L N+ Q++
Sbjct: 63  LSSIFLILAITLVVAMLFTGLVSWTIERVAYRPLRGSFRLAPMISAIGMSILLSNFVQVA 122

Query: 123 QGARQQGVPTLLEGAMRVEVGSGF-VQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCR 181
           QG R + +P ++   + +   +G+ V L Y +I I+V   V +    Y++K T LGR  R
Sbjct: 123 QGPRNKPLPPMVTEVIVIRETNGYEVTLAYKQIIIMVVTAVLLAGFWYLVKKTPLGRAQR 182

Query: 182 ATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTA 241
           A +QDRKMA++LG+N D+ I+  FVIGA +AA+AGV+  M YG  +F  GF+ G+KAFTA
Sbjct: 183 ACEQDRKMAALLGVNVDQTIALTFVIGAALAAVAGVMYLMYYGVVNFADGFVPGVKAFTA 242

Query: 242 AVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLV 301
           AVLGGIGSLPGA+LGGI++G+ E+ +S   + +YKDV +FS+LV+ LIF PQGLLGRP V
Sbjct: 243 AVLGGIGSLPGAVLGGILIGLIETFWSAYFSIEYKDVAAFSILVVTLIFLPQGLLGRPEV 302

Query: 302 AKV 304
            KV
Sbjct: 303 EKV 305