Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  161 bits (407), Expect = 2e-44
 Identities = 94/300 (31%), Positives = 164/300 (54%), Gaps = 15/300 (5%)

Query: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVES 65
           LQ L  G+  G+VY L+A+G+ +V+   G +NFA GE  ++   + A+ +   +  G+  
Sbjct: 8   LQVLSAGIGTGAVYALVALGFNVVFKSTGAMNFAQGEWVVMGGMVTALLIGTFSGTGL-- 65

Query: 66  FPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGA 125
                   ++  +V+ G+ G   ER+  +PL+    L   +  IG+S++ ++   +  G 
Sbjct: 66  -------AVVTAVVLVGIIGLLSERLTVQPLKRPDALVITLVTIGLSIVTRSLVMLVLGK 118

Query: 126 RQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQ 185
           +  G       +    +  G V +    ++I+      + ++    + T LG+  RA   
Sbjct: 119 KPVGYAGF---SGNTALSFGGVSIQSQTLWIIAITLAFLVVMHAFFERTILGKALRAAAA 175

Query: 186 DRKMASILGINTDRVISYVFVIGAVMAALAGVLIT-MNYGTFDFYAGFIIGIKAFTAAVL 244
           DR+ A+I+G+N    +   F I A+  ALAG ++T +   ++D   G + G K F+AA+L
Sbjct: 176 DREAAAIVGVNVGSTVLLSFGIAALAGALAGAIVTPLTLASYD--QGAMFGFKGFSAAML 233

Query: 245 GGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAKV 304
           GG+GSLPGA++GG+ LG+ E+  S  I+SD+KD  +F++L++IL  RP GLLGR  + KV
Sbjct: 234 GGLGSLPGAVVGGLALGLLEAFGSFYISSDFKDAIAFAVLLLILFVRPSGLLGRADIVKV 293