Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  146 bits (369), Expect = 5e-40
 Identities = 83/300 (27%), Positives = 158/300 (52%), Gaps = 14/300 (4%)

Query: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVES 65
           +Q +++GL +G +Y L+A+G+ +++     +NFAHG+  MI   LA   LA     G+  
Sbjct: 5   VQYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPLGL-- 62

Query: 66  FPLLMLGTLLFTIVVTGVYGFTIERIAYKP-LRNSTRLAPLISAIGISLILQNYAQISQG 124
                    L  +   G++G  +ERIA +P L     +  +++ I + ++++++A I   
Sbjct: 63  -------ACLVAVAAGGLFGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQTQ 115

Query: 125 ARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQ 184
              + +P+    +    +G+G          + V A +G+  L    ++T +GR  RA  
Sbjct: 116 GYARPLPSPGVASSVHILGAGIYPQELVIPLVAVVAMLGLRALQ---RHTLVGRAMRAVA 172

Query: 185 QDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVL 244
            ++  A+++GIN + V+++ F +  ++ A AGVL+           G + G+K F  A++
Sbjct: 173 HNKNAAALMGINVNAVVAFSFALAGLLGAAAGVLVAPVVQA-SAAMGVLPGLKGFAVAII 231

Query: 245 GGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAKV 304
           GGI S PG ++ G++ G+ E    G I++  +++  FSL+++ L+  PQGL G+  V KV
Sbjct: 232 GGITSAPGVVITGLVYGVMEKFVEGYISTAAREIIGFSLMILTLLVFPQGLFGKREVMKV 291