Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 306 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  151 bits (381), Expect = 2e-41
 Identities = 86/299 (28%), Positives = 166/299 (55%), Gaps = 9/299 (3%)

Query: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFG 62
           G+  Q L NGL LG++Y ++A+G+++ +G++ +I F+HG+V  + A+ A  +  L+A   
Sbjct: 4   GLLAQYLFNGLMLGTIYAIVAVGFSLFFGVLDVIKFSHGDVVTVGAFSAFGAAGLMAALV 63

Query: 63  VESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQIS 122
             S PL +   L+  +    + G  I R+   PL+N+  +  L++ +    +L+   ++ 
Sbjct: 64  TLSGPLALAVGLIAALGAGALSGVIIGRLLVLPLKNAPGVNVLLATLMAGTVLREAIRLG 123

Query: 123 --QGARQQGVPTLL-EGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRM 179
              G   +  P LL +G ++    +G   +    + IL+A    +     VI  T+LG  
Sbjct: 124 VPNGGNPKPFPALLPDGVLK----AGSFSVGVDSVIILLAGLAVVLATHLVITRTRLGLS 179

Query: 180 CRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAF 239
            RA  QD ++A + G++ +R +   F +G+++A LAG+++ + Y   +F  G ++GI  F
Sbjct: 180 IRAVAQDEEVAQLAGVSFNRTVLGTFALGSMLAGLAGLMLGLYYREINFNMGVMLGIIGF 239

Query: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLI--NSDYKDVFSFSLLVMILIFRPQGLL 296
             AV+GG+GSL G ++GG +    ++L + ++   S YKDV +F++++ ++   P GL+
Sbjct: 240 ACAVVGGLGSLIGPIIGGFLFAGVQTLVTVVLPFTSAYKDVVAFAVIIALIGLFPTGLI 298