Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 294 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  149 bits (375), Expect = 1e-40
 Identities = 96/312 (30%), Positives = 170/312 (54%), Gaps = 33/312 (10%)

Query: 1   MDGIFLQ-QLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA 59
           MD + L   +VNGL  G +YG IA+G ++++G++ ++NFAHG   M+S YL+    +LL 
Sbjct: 1   MDPLILSFAVVNGLLQGGIYGGIALGLSLIFGVLRVVNFAHGSFLMLSLYLSFWCWSLL- 59

Query: 60  YFGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTR------LAPLISAIGISL 113
             G++ +      + L T+    + G+ ++R+   PL    R      L+ L+   GI L
Sbjct: 60  --GMDPYL-----SALVTVPTMFLLGYLVQRLIISPLIVRERALVVEPLSALLLTCGIFL 112

Query: 114 ILQNYAQISQGARQQGV------PTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLL 167
           ++ N A ++ G   + V      P+++ G + V+          T   I  A+ +G+ + 
Sbjct: 113 VVDNLALMAFGPDVRSVQLSYYMPSVMLGPIPVD----------TPRLIAAASSIGVAVA 162

Query: 168 TYV-IKYTKLGRMCRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTF 226
               ++Y+ LGR  RAT Q+R  A++ GI+  +V +  F +G  +  L G LI   +   
Sbjct: 163 VSAWLRYSHLGRAIRATAQNRDAAAMSGIDVPQVYAVTFGLGCAILGLFGALIAP-FIPV 221

Query: 227 DFYAGFIIGIKAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVM 286
           +   G   GIK+F   VLGG+GSLPG+++GG+++G+ E++ S  + +    +FS  L ++
Sbjct: 222 NPQIGVAFGIKSFIVVVLGGMGSLPGSIIGGLVIGVFEAVASQFVTATSAAIFSLGLFIL 281

Query: 287 ILIFRPQGLLGR 298
           +L+ RP G++GR
Sbjct: 282 VLLVRPAGIMGR 293