Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  148 bits (374), Expect = 1e-40
 Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 13/296 (4%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGV 63
           + L QL +GL LG++  ++A+G T+V+G++G++NFAHG ++M+ AY      A    F  
Sbjct: 5   LILMQLFSGLALGAILVMVALGLTIVFGMLGIVNFAHGALFMVGAYAGLWIAAQTGSF-- 62

Query: 64  ESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQ 123
                     L+   +  GV G  IER   +PL   T   PL+   G+  +L    +I+ 
Sbjct: 63  -------WWALIVAPIAVGVLGMAIERFLIRPLYGRTPDDPLLLTFGLGYVLVETVRITF 115

Query: 124 GARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183
           G    G+P     A++  V  G       ++F++    V + LL   ++ T+ G + RA 
Sbjct: 116 GT--DGIPFSAPDALQGVVDLGVGYFPIYRLFVVGVVAVILLLLWVALEKTRFGLIVRAG 173

Query: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243
            +D  +  +LG++  R+   VF +G  + AL GVL            G ++  +AF   V
Sbjct: 174 ARDPLIMKVLGVDVSRLWLLVFGLGVGLTALGGVLAAPMRNVSP-EMGTLVLAEAFVVTV 232

Query: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRP 299
           +GG+GSL GA++ G+++G++ S+ + L   +   +  F L+ +IL+ RPQGL GRP
Sbjct: 233 IGGMGSLLGAVVAGLLVGVAVSM-TALFAPEMATIVMFGLMALILLVRPQGLFGRP 287