Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  154 bits (388), Expect = 3e-42
 Identities = 91/300 (30%), Positives = 162/300 (54%), Gaps = 17/300 (5%)

Query: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60
           M  ++L Q++NGL LG +Y LI++G T+++G++  +NFAHG  +++ AY+   +++L   
Sbjct: 1   MLNLYLFQILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTGN 60

Query: 61  FGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQ 120
           F +          LL   +V     + IER+  + + +   +  ++  +GI+LI+Q  + 
Sbjct: 61  FWL---------ALLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASV 111

Query: 121 ISQG--ARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGR 178
           +  G   +   VP LL G +   V   FV   Y    I+ +  VG+G L  +++ T+ G 
Sbjct: 112 MIWGPVGKSVAVPELLRGVL---VVGDFVYPYYRLFLIVFSGLVGLG-LWLLLERTRFGA 167

Query: 179 MCRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKA 238
           + RA  +  +  S+LG N  R+ S  F +G  +A +AGVL     G   F    I+G+ A
Sbjct: 168 LVRAGSESTETVSLLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGV-A 226

Query: 239 FTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGR 298
           F   V+GG+GS  GA++GG+++G+ +SL + L       +  +  + ++++ RP GL GR
Sbjct: 227 FVVVVIGGMGSFSGALVGGLLVGVVQSLMTTLWPQG-ASLMIYGAMAVVILVRPYGLFGR 285