Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 2e-39
 Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 14/295 (4%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGV 63
           I L  ++NGLT G+VY LIA+G T++YG++ +INFAHG   M++ Y          YF  
Sbjct: 6   ILLPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALY--------AVYFLK 57

Query: 64  ESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQ 123
           E + +     L   IV     G+ ++RI      +      L++ +GI+++++N A +  
Sbjct: 58  ERWGIDPYMALPIAIVGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLLF 117

Query: 124 GARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183
            +  + + T    +    V  G   +   K+     A V  G+L +++  T LGR  RA 
Sbjct: 118 KSDTRSIDTAYSLS---TVAIGPAMIAVPKLVAFAGALVVSGVLFWIMGRTDLGRAIRAV 174

Query: 184 QQDRKMASILGINTDRVISYVFVIG-AVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAA 242
            ++++ A ++GI+ D V +  F IG A + A A  L+   Y       GF+  + AFT  
Sbjct: 175 AKEKEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYVNPQVGGGFV--LVAFTIV 232

Query: 243 VLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLG 297
           VLGG+GS  GA++GG ++G+ ESL    +      +  F++ + +++FRPQG+ G
Sbjct: 233 VLGGMGSFVGALIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFG 287