Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 308 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  327 bits (839), Expect = 2e-94
 Identities = 163/301 (54%), Positives = 222/301 (73%), Gaps = 1/301 (0%)

Query: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64
           FLQQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y++ + +A L   G++
Sbjct: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGID 67

Query: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124
           +  LL+    +  I++   YG++IER+AY+P+RNS RL  LISAIG+S+ LQNY  +++G
Sbjct: 68  TSWLLVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEG 127

Query: 125 ARQQGVPTLLEGAMRVEVGSGF-VQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183
           +R   +P+L  G   V     F   +T  +  I +  F+ M  LT  I+Y+++GR CRA 
Sbjct: 128 SRDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRAC 187

Query: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243
            +D KMAS+LGINTDRVI+  FVIGA MAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 188 AEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247

Query: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAK 303
           LGGIGS+PGAM+GG+ILG++E+L S  ++++YKDV SF+LL+++L+  P G+LGRP V K
Sbjct: 248 LGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEK 307

Query: 304 V 304
           V
Sbjct: 308 V 308